RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 THSD1Q9NS62 852 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 SMOXQ9NWM0 555 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 TCHHQ07283 1943 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 GABRR3A8MPY1 467 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 F3P13726 295 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CD163Q86VB7 1156 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 GPR150Q8NGU9 434 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 E7ESA3 106 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 CHATP28329 748 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 GJA4P35212 333 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF169Q14929 603 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 FXNQ16595 210 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 MFSD9Q8NBP5 474 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 STEAP2Q8NFT2 490 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 OR1J2Q8NGS2 313 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HAS2Q92819 552 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SLC6A20Q9NP91 592 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TEX10Q9NXF1 929 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 NKX6-3A6NJ46 265 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ATP6V1G1O75348 118 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 RAB6AP20340 208 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ELP2Q6IA86 826 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TMPRSS7Q7RTY8 843 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ACKR4Q9NPB9 350 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HCFC2Q9Y5Z7 792 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HES1Q14469 280 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SCCPDHQ8NBX0 429 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 LRRC15Q8TF66 581 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 UCN3Q969E3 161 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 C1QTNF2Q9BXJ5 285 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SAP130Q9H0E3 1048 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 C19orf12Q9NSK7 152 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 OR6C2Q9NZP2 312 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 H0YGG7 62 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 EGFP01133 1207 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TACR3P29371 465 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF92Q03936 586 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SLC10A1Q14973 349 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HHIPL1Q96JK4 782 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 INSM2Q96T92 566 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 EGLN3Q9H6Z9 239 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 CACNG2Q9Y698 323 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 DDAH2O95865 285 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TFP02787 698 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 F13BP05160 661 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 FCGR2AP12318 317 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SLC5A2P31639 672 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 INHBCP55103 352 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 RAB38P57729 211 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 SLC7A9P82251 487 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 IKZF1Q13422 519 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 PAGE3Q5JUK9 113 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 MPP7Q5T2T1 576 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 AAED1Q7RTV5 226 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TEX19Q8NA77 164 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 METTL9Q9H1A3 318 aa12.38□□□□□ -0.43
COL1A1-201ENST00000225964 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 PRLHRP49683 370 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CPZQ66K79 652 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF529Q6P280 563 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RDH10Q8IZV5 341 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF566Q969W8 418 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 PGAP3Q96FM1 320 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF587Q96SQ5 575 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SLC6A16Q9GZN6 736 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 NME4O00746 187 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 EDN1P05305 212 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 DCAF7P61962 342 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 TRIM61Q5EBN2 209 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 COX15Q7KZN9 410 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZFAND1Q8TCF1 268 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ACPTQ9BZG2 426 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 EHFQ9NZC4 300 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 A6NHS1 94 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CENPBD1B2RD01 187 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 F8W036 122 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 BET1O15155 118 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms