RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PPIAP62937 165 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 QPRTQ15274 297 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 TOMM34Q15785 309 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 RNFT1Q5M7Z0 435 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 ARSKQ6UWY0 536 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 C10orf67Q8IYJ2 551 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 FAM109AQ8N4B1 249 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 TMEM234Q8WY98 164 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 SLCO4A1Q96BD0 722 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 ZNF524Q96C55 264 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 BARD1Q99728 777 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 OR2B2Q9GZK3 357 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 AURKCQ9UQB9 309 aa17.99■□□□□ 0.47
PDLIM2-221ENST00000622702 C7orf72A4D263 438 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 FAM47E-STBD1D6RA91 191 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 CDC40O60508 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 FABP3P05413 133 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 HPNP05981 417 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ZNF24P17028 368 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 PRKCAP17252 672 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 MST1P26927 711 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 SLC7A1P30825 629 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 SESN3P58005 492 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 PLPPR5Q32ZL2 321 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 GLYR1Q49A26 553 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 SLC25A53Q5H9E4 307 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 WBP2NLQ6ICG8 309 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 DEF8Q6ZN54 512 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ZDHHC21Q8IVQ6 265 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ZNF563Q8TA94 476 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 FAR1Q8WVX9 515 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ZNF300Q96RE9 604 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 PRR14Q9BWN1 585 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ZDHHC11Q9H8X9 412 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 TMEM27Q9HBJ8 222 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 ACER3Q9NUN7 267 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 DKKL1Q9UK85 242 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 VDAC3Q9Y277 283 aa17.98■□□□□ 0.47
PDLIM2-221ENST00000622702 NBASA2RRP1 2371 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 FAM166BA8MTA8 275 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ZIC3O60481 467 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 NTN1O95631 604 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 RHCEP18577 417 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 SLC1A3P43003 542 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 MAGEA5P43359 124 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 OR1Q1Q15612 314 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 TMEM44Q2T9K0 475 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ENTPD8Q5MY95 495 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ZNF613Q6PF04 617 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 TSPYL5Q86VY4 417 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ATCAYQ86WG3 371 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 NR4A3Q92570 626 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ZBTB8AQ96BR9 441 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 MRGPRX4Q96LA9 322 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 PRRC1Q96M27 445 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 CHID1Q9BWS9 393 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 ACAD8Q9UKU7 415 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 A4GNTQ9UNA3 340 aa17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 HELZ2Q9BYK8 2649 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-221ENST00000622702 TENM4Q6N022 2769 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 A0A1B0GWA3 101 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 hCG_2039718K7EN88 272 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 FKBP6O75344 327 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ENTPD5O75356 428 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 PRSS23O95084 383 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 CRYABP02511 175 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 GP1BBP13224 206 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 HK1P19367 917 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ADH6P28332 368 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 EIF1P41567 113 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 PLEKHM3Q6ZWE6 761 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 GRINAQ7Z429 371 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 CYP4Z1Q86W10 505 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 CADM2Q8N3J6 435 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 GTPBP8Q8N3Z3 284 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 FAM83FQ8NEG4 500 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ADAMTS16Q8TE57 1224 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 DNAJA4Q8WW22 397 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ADAM19Q9H013 955 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 YY1AP1Q9H869 796 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ACKR4Q9NPB9 350 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 ARMC1Q9NVT9 282 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 FAM32AQ9Y421 112 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 NCKAP5O14513 1909 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 RELNP78509 3460 aa17.96■□□□□ 0.47
PDLIM2-221ENST00000622702 UBR5O95071 2799 aaPredicted RBP17.96■□□□□ 0.46
PDLIM2-221ENST00000622702 FREM3P0C091 2139 aa17.96■□□□□ 0.46
PDLIM2-221ENST00000622702 A0A0B4J2E0 115 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 A0A1B0GX12 115 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 TRAPPC13A5PLN9 417 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 CPSF4LA6NMK7 179 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 TFECO14948 347 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 TRAPPC6AO75865 159 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 OR5F1O95221 314 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 ZNF17P17021 662 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 HTR3AP46098 478 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 PIN1Q13526 163 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 TOMM20Q15388 145 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 SWT1Q5T5J6 900 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms