RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 EFNA1P20827 205 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CD9P21926 228 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 DNASE1P24855 282 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PTPN4P29074 926 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OAS2P29728 719 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PKLRP30613 574 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 DLSTP36957 453 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 COILP38432 576 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNJ1P48048 391 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC9A3P48764 834 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 FNTAP49354 379 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAB28P51157 221 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RPS15P62841 145 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNJ10P78508 379 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 BASP1P80723 227 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RELAQ04206 551 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRB7Q14451 532 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMED2Q15363 201 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SNAPC1Q16533 368 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RHBDD2Q6NTF9 364 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 TTC27Q6P3X3 843 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC137Q6PK04 289 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPESP1Q6UW49 350 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMPRSS11FQ6ZWK6 438 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SYVN1Q86TM6 617 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRUNE1Q86TP1 453 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 HPS6Q86YV9 775 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ARHGAP24Q8N264 748 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAPKAPK5-AS1Q8N8E1 139 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NAT8LQ8N9F0 302 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 LINC01555Q8NAE3 123 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR4E2Q8NGC2 313 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR5AR1Q8NGP9 310 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2L8Q8NGY9 312 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR1L3Q8NH93 324 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRK7Q8WTQ7 553 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CT55Q8WUE5 264 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NAT14Q8WUY8 206 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 APOBEC4Q8WW27 367 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLCO2A1Q92959 643 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAD51AP1Q96B01 352 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPACA9Q96E40 222 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NSL1Q96IY1 281 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF285Q96NJ3 590 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 BIRC8Q96P09 236 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 IP6K3Q96PC2 410 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 C17orf62Q9BQA9 187 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAB11FIP5Q9BXF6 653 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NLNQ9BYT8 704 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLHL4Q9C0H6 718 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OPA3Q9H6K4 179 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 AKIRIN1Q9H9L7 192 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRPEL1Q9HAV7 217 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 FANCEQ9HB96 536 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 XAB2Q9HCS7 855 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 A4GALTQ9NPC4 353 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 EQTNQ9NQ60 294 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 INTS10Q9NVR2 710 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CPSF2Q9P2I0 782 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 GNPTGQ9UJJ9 305 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANAPC2Q9UJX6 822 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SNX12Q9UMY4 172 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 FARSAQ9Y285 508 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNK7Q9Y2U2 307 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAGED1Q9Y5V3 778 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 POLEQ07864 2286 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 GTF3C1Q12789 2109 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 USP9YO00507 2555 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 DIDO1Q9BTC0 2240 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1W2PN81 502 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 hCG_1809904A0A1W2PP81 198 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1W2PPE2 198 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1W2PPV9 198 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1W2PR64 198 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 GSAPA4D1B5 854 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 IQCF5A8MTL0 148 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 E7EQ34 232 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 MKRN2OSH3BPM6 223 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 NR5A2O00482 541 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 DNALI1O14645 258 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 RASGRF2O14827 1237 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ATP6V0E1O15342 81 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF749O43361 778 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SRPX2O60687 465 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PSIP1O75475 530 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CEACAM4O75871 244 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 VAPBO95292 243 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 C1orf105O95561 183 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 TTC4O95801 387 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGHV4-59P01825 116 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGHEP01854 428 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 MPC1LP0DKB6 136 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 TCP1P17987 556 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CYP2A7P20853 494 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 IVDP26440 423 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PEBP1P30086 187 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms