RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZNF416Q9BWM5 594 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 C1QTNF4Q9BXJ3 329 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 CCSER1Q9C0I3 900 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC26A1Q9H2B4 701 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 EGLN3Q9H6Z9 239 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ROPN1Q9HAT0 212 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 LRRC4Q9HBW1 653 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 APMAPQ9HDC9 416 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 YAE1D1Q9NRH1 226 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 COX16Q9P0S2 106 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 TBK1Q9UHD2 729 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PSORS1C1Q9UIG5 152 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 LNPEPQ9UIQ6 1025 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 LAMP5Q9UJQ1 280 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GGA2Q9UJY4 613 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 A0A0U1RQS6 177 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CCDC169A6NNP5 214 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLCO1B7G3V0H7 640 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 H0YCG3 227 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 LGALS8O00214 317 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ACOT8O14734 319 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 FPGTO14772 594 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 BUB1O43683 1085 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HUS1O60921 280 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 VPS26AO75436 327 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CTAG2O75638 210 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 PALMO75781 387 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 VENTXO95231 258 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 TDP2O95551 362 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HMBSP08397 361 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 PRG2P13727 222 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 RPL35AP18077 110 aaKnown RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HTR2AP28223 471 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 PDLIM4P50479 330 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 METAP1P53582 386 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 LIMK2P53671 638 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 RPS15P62841 145 aaKnown RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 NOP14P78316 857 aaKnown RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ELP6Q0PNE2 266 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 LRRC74AQ0VAA2 488 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR1C1Q15619 314 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF74Q16587 644 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HNRNPA1L2Q32P51 320 aaKnown RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CMPK2Q5EBM0 449 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SPSB3Q6PJ21 355 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CASC1Q6TDU7 716 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 GDPD4Q6W3E5 623 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 TMEM64Q6YI46 380 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 C17orf107Q6ZR85 190 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 YRDCQ86U90 279 aaKnown RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 AMZ2Q86W34 360 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HORMAD1Q86X24 394 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 HIPK1Q86Z02 1210 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 C3orf56Q8N813 242 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CCDC197Q8NCU1 140 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 IPMKQ8NFU5 416 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR52B4Q8NGK2 314 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 C8orf46Q8TAG6 207 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 CT55Q8WUE5 264 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SELENOMQ8WWX9 145 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SHC3Q92529 594 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC35C1Q96A29 364 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 RAB7BQ96AH8 199 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 OMA1Q96E52 524 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF479Q96JC4 524 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF354BQ96LW1 612 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 FUNDC2Q9BWH2 189 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SHARPINQ9H0F6 387 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 DPEP3Q9H4B8 488 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 POLD4Q9HCU8 107 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 IL17CQ9P0M4 197 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 C6orf203Q9P0P8 240 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 ATXN10Q9UBB4 475 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 SNX6Q9UNH7 406 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 WIPI2Q9Y4P8 454 aa4.07□□□□□ -1.76
HMGB1P23-201ENST00000518743 A0A087WWV3 80 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 hCG_38984A0A1B0GV85 526 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 FAM172BPA6NC97 362 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TRIM64CA6NLI5 447 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 YJEFN3A6XGL0 299 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ANKRD30BLA7E2S9 258 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IDSB3KWA1 339 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 CCL24O00175 119 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 MAGEB3O15480 346 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 HCRTO43612 131 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 SAP30O75446 220 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 KIAA0754O94854 1291 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TXNDC12O95881 172 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 CLPTM1O96005 669 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IGHDP01880 384 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 PCCBP05166 539 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TPM2P07951 284 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 FAM157CP0CG43 387 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 KRT13P13646 458 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 AMD1P17707 334 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IDSP22304 550 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms