RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MBD3L5A6NJ08 208 aaPredicted RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 CLCA1A8K7I4 914 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 SHISA8B8ZZ34 492 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 BCAS1O75363 584 aaPredicted RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 CHRNB4P30926 498 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 APOBEC1P41238 236 aaKnown RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 GZMMP51124 257 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 DLX5P56178 289 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 COPZ1P61923 177 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 EPS8Q12929 822 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 SGCBQ16585 318 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 VMACQ2NL98 169 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 FAM91A1Q658Y4 838 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 C3orf33Q6P1S2 294 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 GRINAQ7Z429 371 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 RPRMLQ8N4K4 120 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 MBD3L2Q8NHZ7 208 aaPredicted RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 CA5BP1Q8WTZ4 195 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 RASSF5Q8WWW0 418 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 WNT2BQ93097 391 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 SDCCAG3Q96C92 435 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 KLHDC3Q9BQ90 382 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 KLHL28Q9NXS3 571 aa13.52□□□□□ -0.25
RNF4-210ENST00000508235 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 SPENQ96T58 3664 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 HELZ2Q9BYK8 2649 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 MED12Q93074 2177 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 EIF1AYO14602 144 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 FCGR2AP12318 317 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 AQP1P29972 269 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 IDH2P48735 452 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 MNAT1P51948 309 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 MAP2K6P52564 334 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 CLDN20P56880 219 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 PCBP3P57721 371 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 PLAURQ03405 335 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 MERTKQ12866 999 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 VEZF1Q14119 521 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 NCCRP1Q6ZVX7 275 aaPredicted RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 PLEKHM3Q6ZWE6 761 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 P4HA3Q7Z4N8 544 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 ADGRE4PQ86SQ3 457 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 GGNQ86UU5 652 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 CLIP4Q8N3C7 705 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 OR2T12Q8NG77 320 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 SLC25A43Q8WUT9 341 aaPredicted RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 KLHL15Q96M94 604 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 NPAS1Q99742 590 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
RNF4-210ENST00000508235 PINK1Q9BXM7 581 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 TIGARQ9NQ88 270 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 TAGLN3Q9UI15 199 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 ZNF175Q9Y473 711 aa13.51□□□□□ -0.25
RNF4-210ENST00000508235 ADAMDEC1O15204 470 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 MFN2O95140 757 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 CLDN14O95500 239 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 IFNA14P01570 189 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 RNF224P0DH78 156 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 SLC7A1P30825 629 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
RNF4-210ENST00000508235 SLC1A3P43003 542 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 POLR2HP52434 150 aaKnown RBP13.5□□□□□ -0.25
RNF4-210ENST00000508235 SUCLG1P53597 346 aaKnown RBP13.5□□□□□ -0.25
RNF4-210ENST00000508235 CLDN15P56746 228 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 EEF1A1P5Q5VTE0 462 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 HBMQ6B0K9 141 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 SEM1Q6ZVN7 128 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 ZNF583Q96ND8 569 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 PSMG3-AS1Q96PY0 264 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 PIF1Q9H611 641 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 NDE1Q9NXR1 346 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 CLCF1Q9UBD9 225 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 CHRNA9Q9UGM1 479 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
RNF4-210ENST00000508235 RNF6Q9Y252 685 aa13.5□□□□□ -0.25
RNF4-210ENST00000508235 MYO18BQ8IUG5 2567 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SLC22A20A6NK97 555 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 M0QX08 132 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SYT5O00445 386 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 AP3D1O14617 1153 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 TNFSF11O14788 317 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 ADAM11O75078 769 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SYNGR4O95473 234 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 C8BP07358 591 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 GKN3PP0CG01 181 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 IL11P20809 199 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SFTPDP35247 375 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 EIF1AXP47813 144 aaKnown RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 CARD18P57730 90 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms