RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DTX3LQ8TDB6 740 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM222BQ8WU58 562 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 S100ZQ8WXG8 99 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 RASL10AQ92737 203 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SLCO4A1Q96BD0 722 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ISOC1Q96CN7 298 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NRBF2Q96F24 287 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CEP170P1Q96L14 293 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF560Q96MR9 790 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 OPALINQ96PE5 141 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 MTMR9Q96QG7 549 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SPAG8Q99932 426 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SOSTQ9BQB4 213 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PINK1Q9BXM7 581 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GLT8D2Q9H1C3 349 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TRPV6Q9H1D0 765 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ABCG8Q9H221 673 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GANQ9H2C0 597 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TUBB1Q9H4B7 451 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 DPEP3Q9H4B8 488 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 HEXA-AS1Q9H8Q6 139 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A7Q9HAW7 530 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A10Q9HAW8 530 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A8Q9HAW9 530 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PLEKHA3Q9HB20 300 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NEK6Q9HC98 313 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 MED17Q9NVC6 651 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GDAP2Q9NXN4 497 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GTSE1Q9NYZ3 720 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 EXTL2Q9UBQ6 330 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PSORS1C1Q9UIG5 152 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 KLK13Q9UKR3 277 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PSMD13Q9UNM6 376 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 AURKCQ9UQB9 309 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 MRPS2Q9Y399 296 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT2A1Q9Y4X1 527 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 KLF2Q9Y5W3 355 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NFASCO94856 1347 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 LRP5O75197 1615 aa3.15□□□□□ -1.9
ECHDC1-217ENST00000488087 LRP6O75581 1613 aa3.15□□□□□ -1.9
ECHDC1-217ENST00000488087 GOLGA8IPA6NC78 632 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CLDN25C9JDP6 229 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ANHXE9PGG2 379 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PSMD12O00232 456 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 KLRC4O43908 158 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 TYROBPO43914 113 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MYO1DO94832 1006 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 STBD1O95210 358 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DEXIO95424 95 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DIRAS3O95661 229 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CPNE6O95741 557 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 IGHV3-13P01766 116 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CHRNGP07510 517 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PLEKP08567 350 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 HSPD1P10809 573 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GZMAP12544 262 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PRKACAP17612 351 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ATF6P18850 670 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 FUT1P19526 365 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 HSPA1LP34931 641 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 TALDO1P37837 337 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MTIF2P46199 727 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PLTPP55058 493 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 NDUFV3P56181 108 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 SSTP61278 116 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CDKL1Q00532 357 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ELP6Q0PNE2 266 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 KRR1Q13601 381 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GNA13Q14344 377 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 GK2Q14410 553 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 HEPACAMQ14CZ8 416 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CDK10Q15131 360 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 KNOP1Q1ED39 458 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 DDI2Q5TDH0 399 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 C1orf146Q5VVC0 180 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CENPPQ6IPU0 288 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CAPN13Q6MZZ7 669 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ANKRD26P1Q6NSI1 321 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 XKRXQ6PP77 449 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 MFSD7Q6UXD7 560 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 NIPA1Q7RTP0 329 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 AKAP14Q86UN6 197 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 CARM1Q86X55 608 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 HPS6Q86YV9 775 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 TBC1D10CQ8IV04 446 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 BATF2Q8N1L9 274 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ABHD12Q8N2K0 398 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 PACRGLQ8N7B6 248 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 ASCC1Q8N9N2 400 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 LEMD2Q8NC56 503 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 OR6M1Q8NGM8 313 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 UBTD2Q8WUN7 234 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC5A11Q8WWX8 675 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 LIPHQ8WWY8 451 aa3.15□□□□□ -1.91
ECHDC1-217ENST00000488087 SHC3Q92529 594 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms