RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ACSM3Q53FZ2 586 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 IER5LQ5T953 404 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 CDPF1Q6NVV7 123 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 C3orf33Q6P1S2 294 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 ETV3LQ6ZN32 361 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 SLC36A1Q7Z2H8 476 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 PXKQ7Z7A4 578 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 NUDT13Q86X67 352 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 C14orf79Q96F83 325 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 MEGF10Q96KG7 1140 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 DERL3Q96Q80 235 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 UTP23Q9BRU9 249 aaKnown RBP17.33■□□□□ 0.36
PTPA-223ENST00000452489 TREM1Q9NP99 234 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 TMEM138Q9NPI0 162 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 POLE3Q9NRF9 147 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 ABRACLQ9P1F3 81 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 KLHL9Q9P2J3 617 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 AK6Q9Y3D8 172 aaKnown RBP17.33■□□□□ 0.36
PTPA-223ENST00000452489 NPFFR2Q9Y5X5 522 aa17.33■□□□□ 0.36
PTPA-223ENST00000452489 ZNF106Q9H2Y7 1883 aaKnown RBP17.33■□□□□ 0.36
PTPA-223ENST00000452489 KANTRA0A1W2PQU2 76 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 TERTO14746 1132 aaKnown RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 FARS2O95363 451 aaKnown RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 F11P03951 625 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 APEHP13798 732 aaKnown RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 ACRV1P26436 265 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 LAP3P28838 519 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 MAT2AP31153 395 aaKnown RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 CCR7P32248 378 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 AP3S2P59780 193 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 BDH1Q02338 343 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 KRT33BQ14525 404 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 AKIRIN2Q53H80 203 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 BAIAP2L2Q6UXY1 529 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 VRK3Q8IV63 474 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 LRRC56Q8IYG6 542 aaPredicted RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 DNAAF1Q8NEP3 725 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 BBS10Q8TAM1 723 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 CD99L2Q8TCZ2 262 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 TNFAIP8L1Q8WVP5 186 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 ACOT11Q8WXI4 607 aaPredicted RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 TMEM68Q96MH6 324 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 C8orf33Q9H7E9 229 aaPredicted RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 CXorf36Q9H7Y0 433 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 TRIM36Q9NQ86 728 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 SURF4O15260 269 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 LATS1O95835 1130 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 FURINP09958 794 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 HTR1FP30939 366 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 CASP6P55212 293 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 MAPK14Q16539 360 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 OLFML2AQ68BL7 652 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 SLC29A4Q7RTT9 530 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 SPATA2LQ8IUW3 424 aaPredicted RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 BRIX1Q8TDN6 353 aaKnown RBP17.32■□□□□ 0.36
PTPA-223ENST00000452489 CRLS1Q9UJA2 301 aa17.32■□□□□ 0.36
PTPA-223ENST00000452489 ANKRD20A5PA0PJZ0 165 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 GABARAPH6UMI1 98 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 SYT5O00445 386 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ANXA2P07355 339 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 XPAP23025 273 aaPredicted RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 MECP2P51608 486 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 RPS13P62277 151 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 NAE1Q13564 534 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 RAB7BQ96AH8 199 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 SLC12A9Q9BXP2 914 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ASF1AQ9Y294 204 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 PCDHGA1Q9Y5H4 931 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 A0A0A6YYC8 382 aaPredicted RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 OR14I1A6ND48 311 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ZNF705EA8MWA4 302 aaPredicted RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 I3L1I5 382 aaPredicted RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 J3QRE1 110 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 PHYHO14832 338 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ASGR2P07307 311 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 OR4Q2P0C623 313 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 SFTPCP11686 197 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 AKR1C3P42330 323 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 STXBP1P61764 594 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 TGIF1Q15583 401 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 LIPJQ5W064 366 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 CYB5R2Q6BCY4 276 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 LRRTM1Q86UE6 522 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 NKAIN4Q8IVV8 208 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 ACBD7Q8N6N7 88 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 SLC25A38Q96DW6 304 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 FAM46AQ96IP4 442 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 TCF7L1Q9HCS4 588 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 HINT3Q9NQE9 182 aaKnown RBP17.31■□□□□ 0.36
PTPA-223ENST00000452489 TAS2R10Q9NYW0 307 aa17.31■□□□□ 0.36
PTPA-223ENST00000452489 RHPN2P1A8MT19 583 aa17.3■□□□□ 0.36
PTPA-223ENST00000452489 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
PTPA-223ENST00000452489 UBE2NLQ5JXB2 153 aa17.3■□□□□ 0.36
PTPA-223ENST00000452489 CPOQ8IVL8 374 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms