RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FBXW10Q5XX13 1052 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 RNF128Q8TEB7 428 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 ZFP90Q8TF47 636 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 ABHD3Q8WU67 409 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 OIT3Q8WWZ8 545 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 TRNT1Q96Q11 434 aaKnown RBP15.81■□□□□ 0.12
LSM5-204ENST00000409909 SLC38A1Q9H2H9 487 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 GLRX2Q9NS18 164 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 PLEKHA6Q9Y2H5 1048 aa15.81■□□□□ 0.12
LSM5-204ENST00000409909 A0A1W2PNR3 127 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 C16orf97H3BN30 126 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 CASKO14936 926 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 SIAH2O43255 324 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 ADAM11O75078 769 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 GOSR1O95249 250 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 AGTR1P30556 359 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 POLR2JP52435 117 aaKnown RBP15.8■□□□□ 0.12
LSM5-204ENST00000409909 KCNJ10P78508 379 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 SELENBP1Q13228 472 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 EXOC3L2Q2M3D2 409 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 DNAJC14Q6Y2X3 702 aaPredicted RBP15.8■□□□□ 0.12
LSM5-204ENST00000409909 ZNF550Q7Z398 422 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 LRRC8CQ8TDW0 803 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 ST8SIA1Q92185 356 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 NINJ1Q92982 152 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 CPNE4Q96A23 557 aaPredicted RBP15.8■□□□□ 0.12
LSM5-204ENST00000409909 VPS33AQ96AX1 596 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 TIGARQ9NQ88 270 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 ACER3Q9NUN7 267 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 LIPT1Q9Y234 373 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 SLC35A3Q9Y2D2 325 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 MED13LQ71F56 2210 aa15.8■□□□□ 0.12
LSM5-204ENST00000409909 ZNF469Q96JG9 3925 aaPredicted RBP15.8■□□□□ 0.12
LSM5-204ENST00000409909 AGAP5A6NIR3 686 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 PGCP20142 388 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 ENPP1P22413 925 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 RYKP34925 604 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 IDH3AP50213 366 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 TXNL4AP83876 142 aaKnown RBP15.79■□□□□ 0.12
LSM5-204ENST00000409909 MERTKQ12866 999 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 GTDC1Q4AE62 458 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 ANKRD34AQ69YU3 496 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 GTF2IRD2BQ6EKJ0 949 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 LRRC74BQ6ZQY2 392 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 PLEKHM3Q6ZWE6 761 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 GTF2IRD2Q86UP8 949 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 MIER2Q8N344 545 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 CNOT9Q92600 299 aaKnown RBP15.79■□□□□ 0.12
LSM5-204ENST00000409909 MED18Q9BUE0 208 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 KLHL4Q9C0H6 718 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.79■□□□□ 0.12
LSM5-204ENST00000409909 C6orf203Q9P0P8 240 aaPredicted RBP15.79■□□□□ 0.12
LSM5-204ENST00000409909 MTORP42345 2549 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 FREM1Q5H8C1 2179 aa15.79■□□□□ 0.12
LSM5-204ENST00000409909 PRR14LQ5THK1 2151 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 IGHV3-15A0A0B4J1V0 119 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 FAM234BA2RU67 622 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 DEFB108AA8MXU0 73 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 TGDSO95455 350 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 KRT75O95678 551 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 PABPC4LP0CB38 370 aaKnown RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 ZCCHC18P0CG32 403 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 KLK2P20151 261 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 SLC7A1P30825 629 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 RAC3P60763 192 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 HPCAP84074 193 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 C3orf33Q6P1S2 294 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 PAMR1Q6UXH9 720 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 STAC2Q6ZMT1 411 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 MSANTD1Q6ZTZ1 278 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 NUFIP2Q7Z417 695 aaKnown RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 LSRQ86X29 649 aaPredicted RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 TUSC5Q8IXB3 177 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 TMEM234Q8WY98 164 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 AURKBQ96GD4 344 aaPredicted RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 REXO5Q96IC2 774 aaKnown RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 ITCHQ96J02 903 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 CCDC106Q9BWC9 280 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 CXXC4Q9H2H0 198 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 C12orf49Q9H741 205 aa15.78■□□□□ 0.12
LSM5-204ENST00000409909 MTHFD2LQ9H903 347 aaPredicted RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 EXOSC3Q9NQT5 275 aaKnown RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 ING1Q9UK53 422 aaPredicted RBP15.78■□□□□ 0.12
LSM5-204ENST00000409909 AP3D1O14617 1153 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 PRKD3O94806 890 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 NR2F1P10589 423 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 ETFAP13804 333 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 H2AFXP16104 143 aaPredicted RBP15.77■□□□□ 0.12
LSM5-204ENST00000409909 RPS4Y1P22090 263 aaKnown RBP15.77■□□□□ 0.12
LSM5-204ENST00000409909 DNASE1P24855 282 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 RNPS1Q15287 305 aaKnown RBP15.77■□□□□ 0.12
LSM5-204ENST00000409909 HDXQ7Z353 690 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 ARFGAP2Q8N6H7 521 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 GTF2H4Q92759 462 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 OR5B2Q96R09 309 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 FOXC2Q99958 501 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 RMND5AQ9H871 391 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms