RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 EFHD2Q96C19 240 aaPredicted RBP15.05■□□□□ -0
COL4A1-204ENST00000543140 TBX5Q99593 518 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 ARHGAP9Q9BRR9 750 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 TNFRSF10DQ9UBN6 386 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 EML5Q05BV3 1969 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 WDR87Q6ZQQ6 2873 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 C17orf105B2RV13 164 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 TMEM150CB9EJG8 249 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ZNF749O43361 778 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 RCBTB2O95199 551 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CLEC2LP0C7M8 214 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 TGM1P22735 817 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 STARD6P59095 220 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 FUT7Q11130 342 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 GRM7Q14831 915 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CRTC2Q53ET0 693 aaPredicted RBP15.04■□□□□ -0
COL4A1-204ENST00000543140 SPANXN2Q5MJ10 180 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 STEAP3Q658P3 488 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 KIRREL2Q6UWL6 708 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 PLEKHG7Q6ZR37 379 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 OAFQ86UD1 273 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ZNF615Q8N8J6 731 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 TNFRSF13CQ96RJ3 184 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.04■□□□□ -0
COL4A1-204ENST00000543140 ERVK13-1Q9NX77 482 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 BOLA2-SMG1P6H3BVE0 249 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 SOX30O94993 753 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 RORCP51449 518 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 FOXK2Q01167 660 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ZNF45Q02386 682 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CRYZQ08257 329 aaKnown RBP15.04■□□□□ -0
COL4A1-204ENST00000543140 DSG2Q14126 1118 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 FGFBP1Q14512 234 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 TUBA3EQ6PEY2 450 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 GRAMD2AQ8IUY3 354 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 LYSMD2Q8IV50 215 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 LNX2Q8N448 690 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 SYT14Q8NB59 555 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CYB561A3Q8NBI2 242 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ZNF485Q8NCK3 441 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ADAMTS18Q8TE60 1221 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 UFD1Q92890 307 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 ART5Q96L15 291 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CEP19Q96LK0 163 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 G6PC3Q9BUM1 346 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 SMURF1Q9HCE7 757 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 CUTCQ9NTM9 273 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 TMEM5Q9Y2B1 443 aa15.04■□□□□ -0
COL4A1-204ENST00000543140 MPDZO75970 2070 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 AGRPO00253 132 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 CSTAP01040 98 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 SLC9A3P48764 834 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 ARL4DP49703 201 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 ATP12AP54707 1039 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 RPS7P62081 194 aaKnown RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 TPBGQ13641 420 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 ZNF141Q15928 474 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 TMEM44Q2T9K0 475 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 PLK5Q496M5 336 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 NIPAL3Q6P499 406 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 SPRYD4Q8WW59 207 aaPredicted RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 PTP4A1Q93096 173 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 SENP5Q96HI0 755 aaPredicted RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 ZNF649Q9BS31 505 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 TRIM2Q9C040 744 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 OR51V1Q9H2C8 321 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 EXOGQ9Y2C4 368 aaKnown RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 SF3B6Q9Y3B4 125 aaKnown RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 BLACEA4D250 179 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 NPIPB9F8W1W9 429 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 REM1O75628 298 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 PPP1R3DO95685 299 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 DCNP07585 359 aaKnown RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 CLUP10909 449 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 CELP19835 753 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 NOS3P29474 1203 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 TNFSF8P32971 234 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 CTBP2P56545 445 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 FABP5Q01469 135 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 CFHR1Q03591 330 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 SPEM1Q8N4L4 309 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 TSLPQ969D9 159 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 SHDQ96IW2 340 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 TMED9Q9BVK6 235 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 ISG20L2Q9H9L3 353 aaKnown RBP15.03■□□□□ -0
COL4A1-204ENST00000543140 TBC1D17Q9HA65 648 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 RPS6KB2Q9UBS0 482 aa15.03■□□□□ -0
COL4A1-204ENST00000543140 IGHV1OR21-1A0A087WYE8 117 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 FITM1A5D6W6 292 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 FAM86C2PA6NEL3 165 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 LRRN3E7EW58 273 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 H0YIG0 161 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 SLC30A4O14863 429 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 PTP4A3O75365 173 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 CLPSP04118 112 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 PAICSP22234 425 aaKnown RBP15.02■□□□□ -0
COL4A1-204ENST00000543140 SDC2P34741 201 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 DMWDQ09019 674 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 PRPF38BQ5VTL8 546 aaKnown RBP15.02■□□□□ -0
COL4A1-204ENST00000543140 MEPCEQ7L2J0 689 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms