RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 C4orf36Q96KX1 117 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
RAB40C-205ENST00000539661 CLEC4AQ9UMR7 237 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 BAIAP2Q9UQB8 552 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 FEZF1A0PJY2 475 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 SLC22A23A1A5C7 686 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 MCRIP1C9JLW8 97 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 BHLHE40O14503 412 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 EMC8O43402 210 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 OR2A4O95047 310 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 CTSLP07711 333 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 FGF2P09038 288 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 GJA1P17302 382 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 SSR2P43308 183 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 OVCH1Q7RTY7 1134 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 HSD17B13Q7Z5P4 300 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 LNX2Q8N448 690 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 EIF4E3Q8N5X7 224 aaKnown RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 AMER3Q8N944 861 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 VN1R2Q8NFZ6 395 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 OR4D9Q8NGE8 314 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 OR5AR1Q8NGP9 310 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 C16orf58Q96GQ5 468 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 OR2A7Q96R45 310 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 MAFFQ9ULX9 164 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 ZC3H12DA2A288 527 aaKnown RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 GALR3O60755 368 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 CLEC3AO75596 197 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 VEGFCP49767 419 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 ACTC1P68032 377 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 ACTA1P68133 377 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 RPL13AP3Q6NVV1 102 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF547Q8IVP9 402 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 FANK1Q8TC84 345 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 SLC2A12Q8TD20 617 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 AUTS2Q8WXX7 1259 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 KAT2AQ92830 837 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 GHSRQ92847 366 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 FBXW5Q969U6 566 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 ELP4Q96EB1 424 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 TEAD3Q99594 435 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 CHIAQ9BZP6 476 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 MTG2Q9H4K7 406 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 AUNIPQ9H7T9 357 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 MED20Q9H944 212 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 CMC2Q9NRP2 79 aa16.34■□□□□ 0.21
RAB40C-205ENST00000539661 PCDHGA9Q9Y5G4 932 aaKnown RBP16.34■□□□□ 0.21
RAB40C-205ENST00000539661 J3QLW9 94 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 GMDSO60547 372 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 PAPLNO95428 1278 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 SBK2P0C263 348 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF19P17023 458 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 DEFB115Q30KQ5 88 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 SFRP4Q6FHJ7 346 aaPredicted RBP16.33■□□□□ 0.21
RAB40C-205ENST00000539661 CFAP77Q6ZQR2 320 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 TMEM25Q86YD3 366 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 ZG16BQ96DA0 208 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 UTP23Q9BRU9 249 aaKnown RBP16.33■□□□□ 0.21
RAB40C-205ENST00000539661 GPN1Q9HCN4 374 aaPredicted RBP16.33■□□□□ 0.21
RAB40C-205ENST00000539661 FLVCR2Q9UPI3 526 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 RCE1Q9Y256 329 aa16.33■□□□□ 0.21
RAB40C-205ENST00000539661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-205ENST00000539661 OR2M5A3KFT3 312 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 SNRPGP15A8MWD9 76 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 PRR23D1E9PI22 279 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-205ENST00000539661 GABARAPH6UMI1 98 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 TMEM127O75204 238 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 REM1O75628 298 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 ATP1B1P05026 303 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 IL5P05113 134 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 PRR23D2P0DMB1 279 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-205ENST00000539661 BMP7P18075 431 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 ACVR1BP36896 505 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF85Q03923 595 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 TMEM35AQ53FP2 167 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF765Q7L2R6 523 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 PRSS45Q7RTY3 260 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 ZFPM2Q8WW38 1151 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 CXorf58Q96LI9 332 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 HS6ST2Q96MM7 605 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 CD180Q99467 661 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 C1QTNF6Q9BXI9 259 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 OR10A4Q9H209 315 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 SLC6A15Q9H2J7 730 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 IFT46Q9NQC8 304 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 TAS2R5Q9NYW4 299 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 SPEGQ15772 3267 aa16.33■□□□□ 0.2
RAB40C-205ENST00000539661 H7BY64 318 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 OR1F1O43749 312 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 GATBO75879 557 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 RPN2P04844 631 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 NT5EP21589 574 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 MECP2P51608 486 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 STXBP1P61764 594 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HTR4Q13639 388 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 RNF113BQ8IZP6 322 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms