RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 BIVMQ86UB2 503 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 IFNEQ86WN2 208 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 CCDC50Q8IVM0 306 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 SLC38A6Q8IZM9 456 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 LINC00612Q8N6U2 182 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ZSCAN4Q8NAM6 433 aaPredicted RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 MFSD9Q8NBP5 474 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ZNRF1Q8ND25 227 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 OR6C4Q8NGE1 309 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 FLVCR1-AS1Q8TAF5 88 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 AGR3Q8TD06 166 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 AENQ8WTP8 325 aaKnown RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 IL1F10Q8WWZ1 152 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 MCUR1Q96AQ8 359 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 C18orf25Q96B23 403 aaPredicted RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 TADA1Q96BN2 335 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 CYYR1Q96J86 154 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 TCEANC2Q96MN5 208 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 RBM14Q96PK6 669 aaKnown RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 SLC6A7Q99884 636 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 NIPSNAP3BQ9BS92 247 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 TMEM121Q9BTD3 319 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 CCDC28BQ9BUN5 200 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 NUP58Q9BVL2 599 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ROPN1BQ9BZX4 212 aaPredicted RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 LIME1Q9H400 295 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 RHOJQ9H4E5 214 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ASB8Q9H765 288 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 YY1AP1Q9H869 796 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 CRLF2Q9HC73 371 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ZFP14Q9HCL3 533 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 ESM1Q9NQ30 184 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 PRR34Q9NV39 138 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 UTP6Q9NYH9 597 aaKnown RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 RCOR3Q9P2K3 495 aaPredicted RBP1.86□□□□□ -2.11
LMNB1-207ENST00000494185 MLXQ9UH92 298 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 PSME2Q9UL46 239 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 SPATA2Q9UM82 520 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 NPTNQ9Y639 398 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 STYXL1Q9Y6J8 313 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 FRMPD4Q14CM0 1322 aa1.86□□□□□ -2.11
LMNB1-207ENST00000494185 NOTCH3Q9UM47 2321 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PPIAL4EA0A075B759 164 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 IGHV3OR16-12A0A075B7B8 117 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 IGHV3-16A0A0C4DH30 117 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 A0A1W2PPE3 182 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 HEATR9A2RTY3 570 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 OR6C65A6NJZ3 312 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 FAM25EA8MYX2 175 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF487B1APH4 448 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 F5H6K3 240 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 SRPX2O60687 465 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 UPK3AO75631 287 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 KBTBD11O94819 623 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 LRATO95237 230 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 MELTFP08582 738 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 IGFBP1P08833 259 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ALPIP09923 528 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PPIAL4FP0DN26 164 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 FOLR2P14207 255 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CYP2B6P20813 491 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 IMPDH1P20839 514 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PCMT1P22061 227 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ATP5A1P25705 553 aaKnown RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PRKAR2BP31323 418 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CD80P33681 288 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 UGT1A5P35504 534 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 RPL4P36578 427 aaKnown RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CRYBB2P43320 205 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 BDKRB1P46663 353 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 GSK3BP49841 420 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 DUSP3P51452 185 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PRELPP51888 382 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CRYBB1P53674 252 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 MFAP2P55001 183 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PLOD1Q02809 727 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF33BQ06732 778 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 KLRC3Q07444 240 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 RGS1Q08116 209 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 BST2Q10589 180 aaKnown RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 RAB40BQ12829 278 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ZIC1Q15915 447 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CCL14Q16627 93 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 SLC5A12Q1EHB4 618 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 Q1RN00 199 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 BCL7AQ4VC05 210 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 SPANXN2Q5MJ10 180 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 PDZK1Q5T2W1 519 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 FHL5Q5TD97 284 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 SLX4IPQ5VYV7 408 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CARD17Q5XLA6 110 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 LRRC66Q68CR7 880 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 ANGPTL8Q6UXH0 198 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 APOOLQ6UXV4 268 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 APTXQ7Z2E3 356 aaKnown RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 HPS6Q86YV9 775 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CCDC71Q8IV32 467 aaPredicted RBP1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CLEC4FQ8N1N0 589 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 BPIFB2Q8N4F0 458 aa1.85□□□□□ -2.11
LMNB1-207ENST00000494185 CEP112Q8N8E3 955 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms