RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 NEUROG3Q9Y4Z2 214 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 LOC100131303A0A0U1RQF7 123 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 A0A0U1RRA0 63 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 WASHC1A8K0Z3 465 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 HCN1O60741 890 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ECI2O75521 394 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CXCL14O95715 111 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 LALBAP00709 142 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PCCBP05166 539 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PNMA6AP0CW24 399 aaPredicted RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PDHBP11177 359 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 RALAP11233 206 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CRISP2P16562 243 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ATP5A1P25705 553 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 SRP54P61011 504 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 SNX1Q13596 522 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 FAM83EQ2M2I3 478 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ZNF674Q2M3X9 581 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 DEFB116Q30KQ4 102 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 DNAJC21Q5F1R6 531 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PAGE3Q5JUK9 113 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 FAM120AOSQ5T036 256 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 LIPNQ5VXI9 398 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 SYT10Q6XYQ8 523 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 TMEM184AQ6ZMB5 413 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CCDC91Q7Z6B0 441 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ANKRD20A12PQ8NF67 263 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 TMEM185AQ8NFB2 350 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 OR2T33Q8NG76 320 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 OR10G2Q8NGC3 310 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 FAM151AQ8WW52 585 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PTP4A1Q93096 173 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ADIPOR1Q96A54 375 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ZNF560Q96MR9 790 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 OR2M2Q96R28 347 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 MCHR1Q99705 422 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 SLC30A2Q9BRI3 323 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CRNKL1Q9BZJ0 848 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ULBP2Q9BZM5 246 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 ARGLU1Q9NWB6 273 aaPredicted RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 MTRF1LQ9UGC7 380 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CYTH4Q9UIA0 394 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 APPL1Q9UKG1 709 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 PLA2G4CQ9UP65 541 aa0.94□□□□□ -2.26
CCDC93-209ENST00000488908 CARHSP1Q9Y2V2 147 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 TDRKHQ9Y2W6 561 aaKnown RBP0.94□□□□□ -2.26
CCDC93-209ENST00000488908 TTC21BQ7Z4L5 1316 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 A0A1W2PRQ8 180 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ESYT2A0FGR8 921 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 H0YL77 283 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 FMO6PO60774 539 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ZNF780AO75290 641 aaPredicted RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 STX11O75558 287 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GOSR1O95249 250 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 CXCL10P02778 98 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ABHD2P08910 425 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 HBQ1P09105 142 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GSTT2P0CG29 244 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GSTT2BP0CG30 244 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 TSPY4P0CV99 314 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 TSPY10P0CW01 314 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 RNH1P13489 461 aaKnown RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 UQCRBP14927 111 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GLULP15104 373 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 MUTP22033 750 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 DPP4P27487 766 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 CTNNA1P35221 906 aaKnown RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 COPB2P35606 906 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 NOVA1P51513 510 aaKnown RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 LIM2P55344 173 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 PRPS1P60891 318 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GFPT1Q06210 699 aaPredicted RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 CCDC173Q0VFZ6 552 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 TFDP1Q14186 410 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 C2orf76Q3KRA6 126 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ZNF311Q5JNZ3 666 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 C1orf146Q5VVC0 180 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ETFRF1Q6IPR1 90 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 NEK5Q6P3R8 708 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 SLC39A4Q6P5W5 647 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 C1orf186Q6ZWK4 172 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 COX15Q7KZN9 410 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 C6orf120Q7Z4R8 191 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 CCDC170Q8IYT3 715 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 BATF2Q8N1L9 274 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 STKLD1Q8NE28 680 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 UBALD1Q8TB05 177 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 SELENOMQ8WWX9 145 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 PINX1Q96BK5 328 aaKnown RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 UPRTQ96BW1 309 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 RASL11BQ9BPW5 248 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 RNF126Q9BV68 326 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 GPR61Q9BZJ8 451 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ATG10Q9H0Y0 220 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 SIRPDQ9H106 197 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 POLR3FQ9H1D9 316 aaPredicted RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 SLC25A51Q9H1U9 297 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 ALDH8A1Q9H2A2 487 aaPredicted RBP0.93□□□□□ -2.26
CCDC93-209ENST00000488908 LPAR2Q9HBW0 351 aa0.93□□□□□ -2.26
CCDC93-209ENST00000488908 LHX9Q9NQ69 397 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms