RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 FCRL5Q96RD9 977 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 CSF3RQ99062 836 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 DDX47Q9H0S4 455 aaKnown RBP4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 TOR3AQ9H497 397 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 MARCH7Q9H992 704 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 FKRPQ9H9S5 495 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 EDA2RQ9HAV5 297 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 MMP26Q9NRE1 261 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 SIRT3Q9NTG7 399 aaPredicted RBP4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 PARVAQ9NVD7 372 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 NLE1Q9NVX2 485 aaPredicted RBP4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 COPS7AQ9UBW8 275 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 RCOR1Q9UKL0 485 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 MYO6Q9UM54 1294 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 CORO2BQ9UQ03 480 aa4.41□□□□□ -1.7
SBDSP1-204ENST00000453858 FAT1Q14517 4588 aa4.4□□□□□ -1.7
SBDSP1-204ENST00000453858 MPPED1O15442 326 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 PSIP1O75475 530 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 RP2O75695 350 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ESRRBO95718 433 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 PLGP00747 810 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 IGHV2-5P01817 119 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 GBAP04062 536 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TUBBP07437 444 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ALOX5P09917 674 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 OR4A8P0C604 315 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 MYZAPP0CAP1 466 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 DESP17661 470 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TNNI3P19429 210 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 GGT1P19440 569 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 EEF1GP26641 437 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ABCD3P28288 659 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 GDF5P43026 501 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ATP4BP51164 291 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF134P52741 427 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 RAB38P57729 211 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 IGLV3-21P80748 117 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 HMGCS1Q01581 520 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 IL1RL1Q01638 556 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 DCTN2Q13561 401 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TSTA3Q13630 321 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TMEM44Q2T9K0 475 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 DPCR1Q3MIW9 517 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 FRG2Q64ET8 278 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHL17Q6TDP4 642 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 SPATA19Q7Z5L4 167 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 GALNT10Q86SR1 603 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 LUZP1Q86V48 1076 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 KRT73Q86Y46 540 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 WDFY1Q8IWB7 410 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 SAMD14Q8IZD0 417 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF433Q8N7K0 673 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 PLD5Q8N7P1 536 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 WDR31Q8NA23 367 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 IPMKQ8NFU5 416 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 OR52K1Q8NGK4 314 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 RNF138Q8WVD3 245 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ASB10Q8WXI3 467 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 DYRK2Q92630 601 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 MLST8Q9BVC4 326 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 NPLQ9BXD5 320 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 C1QTNF6Q9BXI9 259 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 TNFRSF19Q9NS68 423 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 CA10Q9NS85 328 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 MRPS18AQ9NVS2 196 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC17A6Q9P2U8 582 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 NDRG4Q9ULP0 352 aaKnown RBP4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 NENFQ9UMX5 172 aa4.4□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF816-ZNF321PA0A0X1KG74 233 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 OR51F1A6NGY5 319 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TRAPPC2LH3BP13 241 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 M0R1B8 84 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 APOL1O14791 398 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PSMA7O14818 248 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ADAMDEC1O15204 470 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SEC14L5O43304 696 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 GPR137BO60478 399 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 LDB3O75112 727 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 NXPH3O95157 252 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ENO3P13929 434 aaPredicted RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 NPPBP16860 134 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 NAGAP17050 411 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ACHEP22303 614 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PRKAR1BP31321 381 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 HNF4AP41235 474 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SKIV2L2P42285 1042 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SYKP43405 635 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PRKAG1P54619 331 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 BTN3A2P78410 334 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 MRPS11P82912 194 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 MPP3Q13368 585 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PNOCQ13519 176 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SERTAD2Q14140 314 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms