RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CSO75390 466 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 NME6O75414 186 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RFPL2O75678 378 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADAP1O75689 374 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SEC14L2O76054 403 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 AQP8O94778 261 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 STBD1O95210 358 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FADS2O95864 444 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TCRBP04435 133 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CRYGBP07316 175 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CD48P09326 243 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PNMTP11086 282 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 G6PDP11413 515 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF30P17039 623 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GABRB1P18505 474 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANXA7P20073 488 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CASP1P29466 404 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 AKT2P31751 481 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 S100A11P31949 105 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ID1P41134 155 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 IDH2P48735 452 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PDLIM4P50479 330 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 MAZP56270 477 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 VSX2P58304 361 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNAJB13P59910 316 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FGL1Q08830 312 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PMPCAQ10713 525 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 BNIP2Q12982 314 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 BTN1A1Q13410 526 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GRAPQ13588 217 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ARHGEF7Q14155 803 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PTGES3Q15185 160 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TAB1Q15750 504 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RBBP7Q16576 425 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 NDUFA9Q16795 377 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF699Q32M78 642 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SBK1Q52WX2 424 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 IFI44LQ53G44 452 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACSBG2Q5FVE4 666 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SIRPB2Q5JXA9 342 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 DCAF10Q5QP82 559 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 C6orf136Q5SQH8 315 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RSBN1Q5VWQ0 802 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SYPL2Q5VXT5 272 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRIQKQ629K1 86 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF790Q6PG37 636 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLEU7Q6UYE1 221 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ASCL4Q6XD76 172 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TCF24Q7RTU0 167 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC46A3Q7Z3Q1 461 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GRINAQ7Z429 371 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 S100A7AQ86SG5 101 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GALNT10Q86SR1 603 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CLEC14AQ86T13 490 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF546Q86UE3 836 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CARM1Q86X55 608 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 WDFY1Q8IWB7 410 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 NRMQ8IXM6 262 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZC3H3Q8IXZ2 948 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF34Q8IZ26 560 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 MARVELD2Q8N4S9 558 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TEX26Q8N6G2 289 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 EXD3Q8N9H8 876 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF610Q8N9Z0 462 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC44A5Q8NCS7 719 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM161BQ8NDZ6 487 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CHDHQ8NE62 594 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM71CQ8NEG0 241 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 MDGA1Q8NFP4 955 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 KBTBD8Q8NFY9 601 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR10W1Q8NGF6 305 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR13C5Q8NGS8 318 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNG3Q8TAE7 436 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PROKR1Q8TCW9 393 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAB40AQ8WXH6 277 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACOT11Q8WXI4 607 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 C11orf40Q8WZ69 217 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SNAPC3Q92966 411 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FKBP10Q96AY3 582 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PPWD1Q96BP3 646 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TM4SF18Q96CE8 201 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SNRNP40Q96DI7 357 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CMTM5Q96DZ9 223 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 PGAM5Q96HS1 289 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CAPZA3Q96KX2 299 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SNX22Q96L94 193 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 DOK1Q99704 481 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FOXB1Q99853 325 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ECSITQ9BQ95 431 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM43Q9BTV4 400 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 MSTO1Q9BUK6 570 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 C1orf43Q9BWL3 253 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 STRADBQ9C0K7 418 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GPR88Q9GZN0 384 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ILKAPQ9H0C8 392 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 TTYH1Q9H313 450 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms