RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 TMEM38AQ9H6F2 299 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 ARMC7Q9H6L4 198 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 ZNF443Q9Y2A4 671 aaPredicted RBP17.09■□□□□ 0.33
MRPL54-201ENST00000330133 DSPPQ9NZW4 1301 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 A0A0G2JNJ9 132 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 KDM4EB2RXH2 506 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 DNAJA2O60884 412 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 BCAS1O75363 584 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 PGM3O95394 542 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 THBS1P07996 1170 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 GP1BBP13224 206 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 PRKCAP17252 672 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 PSMA4P25789 261 aaKnown RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 ELK4P28324 431 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 CEACAM8P31997 349 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 RYKP34925 604 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 SUCLG1P53597 346 aaKnown RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 CLDN20P56880 219 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 MTPNP58546 118 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 SCARB2Q14108 478 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 CYP51A1Q16850 503 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 SLC25A53Q5H9E4 307 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 PDSS1Q5T2R2 415 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 MRPL2Q5T653 305 aaKnown RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 SEM1Q6ZVN7 128 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 P4HA3Q7Z4N8 544 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 VRK2Q86Y07 508 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 KRT73Q86Y46 540 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 ZNF440Q8IYI8 595 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 C10orf111Q8N326 155 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 TNIP2Q8NFZ5 429 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 LILRB4Q8NHJ6 448 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 RP9Q8TA86 221 aaKnown RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 ZNF563Q8TA94 476 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 WNT2BQ93097 391 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 LRRC58Q96CX6 371 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 UCN2Q96RP3 112 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 TM9SF2Q99805 663 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 ACER3Q9NUN7 267 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 Q9UFV3 132 aa17.08■□□□□ 0.32
MRPL54-201ENST00000330133 KLF2Q9Y5W3 355 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-201ENST00000330133 MBD3L4A6NDZ8 208 aaPredicted RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 MBD3L3A6NE82 208 aaPredicted RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 MBD3L5A6NJ08 208 aaPredicted RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 PRSS44E7EML9 344 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 EIF1AYO14602 144 aaKnown RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 OPN1LWP04000 364 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 FREM3P0C091 2139 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 ETS2P15036 469 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 HTR1EP28566 365 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SESN3P58005 492 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SELPLGQ14242 412 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SGCBQ16585 318 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 ZNF311Q5JNZ3 666 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 ADGRE4PQ86SQ3 457 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 GRAMD2AQ8IUY3 354 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 LILRA2Q8N149 483 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 MBD3L2Q8NHZ7 208 aaPredicted RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SPATA5L1Q9BVQ7 753 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 CCDC106Q9BWC9 280 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SPATA9Q9BWV2 254 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 TRIM8Q9BZR9 551 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 SERINC1Q9NRX5 453 aa17.07■□□□□ 0.32
MRPL54-201ENST00000330133 DNAJB12Q9NXW2 375 aaKnown RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 USP9XQ93008 2570 aaPredicted RBP17.07■□□□□ 0.32
MRPL54-201ENST00000330133 GJE1A6NN92 205 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 H0YC42 278 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ETV2O00321 342 aaPredicted RBP17.06■□□□□ 0.32
MRPL54-201ENST00000330133 TOXO94900 526 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 NTN1O95631 604 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 PABPC4LP0CB38 370 aaKnown RBP17.06■□□□□ 0.32
MRPL54-201ENST00000330133 COX4I1P13073 169 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 UQCRBP14927 111 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
MRPL54-201ENST00000330133 CLDN15P56746 228 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 RBBP4Q09028 425 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 MERTKQ12866 999 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ADRM1Q16186 407 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 NANOGP8Q6NSW7 305 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ZNF836Q6ZNA1 936 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ESPNLQ6ZVH7 1005 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 GGNQ86UU5 652 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 POU5F2Q8N7G0 328 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 C9orf106Q8NAJ2 232 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 C11orf65Q8NCR3 313 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 HIPK4Q8NE63 616 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ATP6V1C2Q8NEY4 427 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ZNF607Q96SK3 696 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 TMEM185BQ9H7F4 350 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 KAT8Q9H7Z6 458 aaKnown RBP17.06■□□□□ 0.32
MRPL54-201ENST00000330133 NANOGQ9H9S0 305 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 KCNJ16Q9NPI9 418 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 PAQR5Q9NXK6 330 aaPredicted RBP17.06■□□□□ 0.32
MRPL54-201ENST00000330133 CLCF1Q9UBD9 225 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 ANGPT4Q9Y264 503 aa17.06■□□□□ 0.32
MRPL54-201ENST00000330133 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
MRPL54-201ENST00000330133 CFAP73A6NFT4 308 aa17.05■□□□□ 0.32
MRPL54-201ENST00000330133 SLC22A20A6NK97 555 aa17.05■□□□□ 0.32
MRPL54-201ENST00000330133 FAM90A27PA6NNH2 459 aa17.05■□□□□ 0.32
MRPL54-201ENST00000330133 IL11P20809 199 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms