RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 THUMPD1Q9NXG2 353 aaKnown RBP11.42□□□□□ -0.58
RETREG3-203ENST00000585894 DNAJB12Q9NXW2 375 aaKnown RBP11.42□□□□□ -0.58
RETREG3-203ENST00000585894 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
RETREG3-203ENST00000585894 SUCOQ9UBS9 1254 aaKnown RBP11.42□□□□□ -0.58
RETREG3-203ENST00000585894 SLC5A6Q9Y289 635 aa11.42□□□□□ -0.58
RETREG3-203ENST00000585894 ZNF443Q9Y2A4 671 aaPredicted RBP11.42□□□□□ -0.58
RETREG3-203ENST00000585894 ZNF337Q9Y3M9 751 aa11.42□□□□□ -0.58
RETREG3-203ENST00000585894 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
RETREG3-203ENST00000585894 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
RETREG3-203ENST00000585894 SPTBN1Q01082 2364 aaKnown RBP11.42□□□□□ -0.58
RETREG3-203ENST00000585894 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 H3BML4 177 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 AP3D1O14617 1153 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 BCKDKO14874 412 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 HNRNPCL1O60812 293 aaKnown RBP11.41□□□□□ -0.58
RETREG3-203ENST00000585894 DBIP07108 87 aaKnown RBP11.41□□□□□ -0.58
RETREG3-203ENST00000585894 LINGO3P0C6S8 592 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 HNRNPCL4P0DMR1 293 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 NID1P14543 1247 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 MSX1P28360 303 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 LHX2P50458 406 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 CASP6P55212 293 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 GANABQ14697 944 aaKnown RBP11.41□□□□□ -0.58
RETREG3-203ENST00000585894 QPRTQ15274 297 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 NHSL2Q5HYW2 709 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 WLSQ5T9L3 541 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 REEP3Q6NUK4 255 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 COMTD1Q86VU5 262 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 UBQLNLQ8IYU4 475 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 FAM71CQ8NEG0 241 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 OR5W2Q8NH69 310 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 FBXO27Q8NI29 283 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 BBS10Q8TAM1 723 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 WDYHV1Q96HA8 205 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 RNF145Q96MT1 663 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 LRRC37BQ96QE4 947 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 LAT2Q9GZY6 243 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 TMEM38AQ9H6F2 299 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 TMEM185BQ9H7F4 350 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 BCL2L10Q9HD36 194 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 GID8Q9NWU2 228 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 CMTM6Q9NX76 183 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 MRPS18CQ9Y3D5 142 aaKnown RBP11.41□□□□□ -0.58
RETREG3-203ENST00000585894 NCOA6Q14686 2063 aaPredicted RBP11.41□□□□□ -0.58
RETREG3-203ENST00000585894 DOPEY1Q5JWR5 2465 aa11.41□□□□□ -0.58
RETREG3-203ENST00000585894 SEC14L5O43304 696 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 FRS3O43559 492 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 EIF4E2O60573 245 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ZG16O60844 167 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 GCM2O75603 506 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 DCTN3O75935 186 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 OPN1SWP03999 348 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ADH7P40394 386 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CLDN18P56856 261 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CLDN20P56880 219 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 EEF1A1P68104 462 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 TMEM44Q2T9K0 475 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 NET1Q7Z628 596 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ULK2Q8IYT8 1036 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 FAM26EQ8N5C1 309 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 FITM2Q8N6M3 262 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 C11orf65Q8NCR3 313 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CCDC197Q8NCU1 140 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CMTM5Q96DZ9 223 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CCDC120Q96HB5 630 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 GPATCH1Q9BRR8 931 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 SLC35A3Q9Y2D2 325 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 MEMO1Q9Y316 297 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 USP9YO00507 2555 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 A0A1B0GUH1 482 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 EFNA2O43921 213 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 TPST1O60507 370 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ACTL6AO96019 429 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 LDLRP01130 860 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 NPPAP01160 153 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 PABPC4LP0CB38 370 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ESRRAP11474 423 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 PEPDP12955 493 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 PRG2P13727 222 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 PRKCAP17252 672 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 POU3F2P20265 443 aaPredicted RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 PSMA4P25789 261 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ACVR2AP27037 513 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 SLC7A2P52569 658 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 SUCLG1P53597 346 aaKnown RBP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 HOXC5Q00444 222 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ART3Q13508 389 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 GNA13Q14344 377 aa11.4□□□□□ -0.58
RETREG3-203ENST00000585894 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.4□□□□□ -0.58
RETREG3-203ENST00000585894 LIN52Q52LA3 116 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms