RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 FEN1P39748 380 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 GSTM5P46439 218 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 HNRNPFP52597 415 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PGGT1BP53609 377 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SEC24CP53992 1094 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 WNT3P56703 355 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SLC37A1P57057 533 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 NAA20P61599 178 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TRA2BP62995 288 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SIRPAP78324 504 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 GUCY2DQ02846 1103 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 BTKQ06187 659 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 C2orf54Q08AI8 447 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 STX5Q13190 355 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SNTB1Q13884 538 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CAPRIN1Q14444 709 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 FASTKD3Q14CZ7 662 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 EBPQ15125 230 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 RASA2Q15283 850 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 EXOC3L2Q2M3D2 409 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DEFB113Q30KQ7 82 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ZNF791Q3KP31 576 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PLA1AQ53H76 456 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SPIN4Q56A73 249 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TIGD3Q6B0B8 471 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 RGS7BPQ6MZT1 257 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 VWA1Q6PCB0 445 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ZDHHC24Q6UX98 284 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PAMR1Q6UXH9 720 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TMEM64Q6YI46 380 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 Q6ZPA2 131 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CMC1Q7Z7K0 106 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ISCA2Q86U28 154 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 LDLRAD3Q86YD5 345 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PLCZ1Q86YW0 608 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 LIX1LQ8IVB5 337 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SLC22A9Q8IVM8 553 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 C9orf40Q8IXQ3 194 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 FAM9CQ8IZT9 166 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CCNYL1Q8N7R7 359 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CEP112Q8N8E3 955 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 C17orf47Q8NEP4 570 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SPATA4Q8NEY3 305 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TNIP2Q8NFZ5 429 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 OR52R1Q8NGF1 315 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CEP70Q8NHQ1 597 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 LINC01560Q8TB33 94 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SPPL2AQ8TCT8 520 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ZPLD1Q8TCW7 415 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DOK4Q8TEW6 326 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 UBTD2Q8WUN7 234 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TMEM171Q8WVE6 324 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 KCTD4Q8WVF5 259 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 LINC00476Q8WZB0 136 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SMPDL3BQ92485 455 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SPSB4Q96A44 273 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 EXOSC8Q96B26 276 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ANKRD9Q96BM1 317 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 INTS12Q96CB8 462 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 NXNL1Q96CM4 212 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 NMD3Q96D46 503 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ERP27Q96DN0 273 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TRIM44Q96DX7 344 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 MTBPQ96DY7 904 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 OMA1Q96E52 524 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PIK3IP1Q96FE7 263 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TRMT61AQ96FX7 289 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TMEM41AQ96HV5 264 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ZNF845Q96IR2 970 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 C18orf12Q96KH6 178 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DACH2Q96NX9 599 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 TIMP4Q99727 224 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 MRPL57Q9BQC6 102 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PIGQQ9BRB3 760 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SORBS1Q9BX66 1292 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ANGPTL4Q9BY76 406 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 KLHL4Q9C0H6 718 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DDX31Q9H8H2 851 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SYNPO2LQ9H987 977 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 UBTD1Q9HAC8 227 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 BRF2Q9HAW0 419 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CACYBPQ9HB71 228 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 SERHLQ9NQF3 203 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 RRAGDQ9NQL2 400 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DEPPQ9NTK1 212 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 DDX18Q9NVP1 670 aaKnown RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 FAIMQ9NVQ4 179 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PAQR5Q9NXK6 330 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PSD3Q9NYI0 1048 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 ELOVL5Q9NYP7 299 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 VPS29Q9UBQ0 182 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 MID2Q9UJV3 735 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 RPH3AQ9Y2J0 694 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 LIPGQ9Y5X9 500 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CPAMD8Q8IZJ3 1885 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 PCSK5Q92824 1860 aa3.41□□□□□ -1.86
HMGN1P11-201ENST00000508668 CRYBG3Q68DQ2 2970 aa3.4□□□□□ -1.86
HMGN1P11-201ENST00000508668 POLQO75417 2590 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms