RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CENPKQ9BS16 269 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RAB34Q9BZG1 259 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 AZI2Q9H6S1 392 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FANCEQ9HB96 536 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RPRD1BQ9NQG5 326 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 EXOSC3Q9NQT5 275 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 KLHL28Q9NXS3 571 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SIGLEC8Q9NYZ4 499 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 EHFQ9NZC4 300 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCDC180Q9P1Z9 1646 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SPATA2Q9UM82 520 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 PRPF19Q9UMS4 504 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ABCG2Q9UNQ0 655 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 GAB2Q9UQC2 676 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 USP6P35125 1406 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SALL1Q9NSC2 1324 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHV2-70DA0A0C4DH43 119 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TEX48A0A1B0GUV7 120 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SMCO3A2RU48 225 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ACOD1A6NK06 481 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 HAS3O00219 553 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ABCD4O14678 606 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 PRKAB2O43741 272 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGLV1-44P01699 117 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 KRT6AP02538 564 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 WNT2P09544 360 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 STAG3L3P0CL85 134 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 PVRP15151 417 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 GCAP28676 217 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 YWHABP31946 246 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CRYBB2P43320 205 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C21orf59P57076 290 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RPL8P62917 257 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 LAGE3Q14657 143 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 WDR43Q15061 677 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CNPY1Q3B7I2 92 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TEX44Q53QW1 395 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 MS4A13Q5J8X5 152 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 OTUD3Q5T2D3 398 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 DHDDSQ86SQ9 333 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TPRA1Q86W33 373 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CATSPER3Q86XQ3 398 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 MTURNQ8N3F0 131 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR5L2Q8NGL0 311 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C11orf45Q8TAV5 145 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CRYGNQ8WXF5 182 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 PEX13Q92968 403 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF501Q96CX3 271 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RAB3CQ96E17 227 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 MOCOSQ96EN8 888 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 NODALQ96S42 347 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CITED1Q99966 193 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SPATA16Q9BXB7 569 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 IQCGQ9H095 443 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLITRK2Q9H156 845 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMEM185BQ9H7F4 350 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 NUDT15Q9NV35 164 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM120CQ9NX05 1096 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 PISDQ9UG56 409 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SCML2Q9UQR0 700 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 AK6Q9Y3D8 172 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CHTOPQ9Y3Y2 248 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RB1CC1Q8TDY2 1594 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ARPC4-TTLL3A0A0A6YYG9 625 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCDC182A6NF36 153 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 SPECC1L-ADORA2AF8WAN1 911 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 SNAP91O60641 907 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 DIRAS1O95057 198 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 AP2A1O95782 977 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 RALBP11234 206 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 RNH1P13489 461 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ETS2P15036 469 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF26P17031 533 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 SERPINA2P20848 420 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGFBP5P24593 272 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 HMGB2P26583 209 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 GNA11P29992 359 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 NMT1P30419 496 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 CASQ1P31415 396 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 RGS8P57771 180 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ENPEPQ07075 957 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 KLRB1Q12918 225 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 PEX6Q13608 980 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 CRMP1Q14194 572 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 HADHQ16836 314 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZFP69Q49AA0 526 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 C14orf28Q4W4Y0 310 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 VWA2Q5GFL6 755 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 WSCD1Q658N2 575 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 PVRIGQ6DKI7 326 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ARMCX5Q6P1M9 558 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 CLEC2AQ6UVW9 174 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 C18orf65Q6ZTR6 163 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 PRSS48Q7RTY5 328 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 LUZP2Q86TE4 346 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms