RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 AP3D1O14617 1153 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 CLOCKO15516 846 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 FRS3O43559 492 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 HS6ST1O60243 411 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TIPRLO75663 272 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 CYP7B1O75881 506 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 WISP2O76076 250 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 DIRAS1O95057 198 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SNX4O95219 450 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 STAMBPO95630 424 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 CSTAP01040 98 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 MT-ND1P03886 318 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PDGFAP04085 211 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 UBTFL6P0CB48 400 aaPredicted RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 ANPEPP15144 967 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 HPGDP15428 266 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 HOXB6P17509 224 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 RHCEP18577 417 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ENDOUP21128 410 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 HTR2AP28223 471 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 MSX1P28360 303 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 EVI2BP34910 448 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 YAP1P46937 504 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 LIMS1P48059 325 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 CD97P48960 835 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TNFSF10P50591 281 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 P2RX1P51575 399 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 DLX5P56178 289 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 EPS8Q12929 822 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SKP2Q13309 424 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 OR1Q1Q15612 314 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TOMM34Q15785 309 aaPredicted RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 LIN52Q52LA3 116 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TBCELQ5QJ74 424 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 RNF220Q5VTB9 566 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 BROXQ5VW32 411 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TIGD3Q6B0B8 471 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ZFP1Q6P2D0 407 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 LRRC69Q6ZNQ3 347 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 TMEM179BQ7Z7N9 219 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 AMIGO2Q86SJ2 522 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ZDHHC21Q8IVQ6 265 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SULF2Q8IWU5 870 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 FADS6Q8N9I5 356 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 GATSQ8NAP1 163 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PIK3C3Q8NEB9 887 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 OR5W2Q8NH69 310 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PHOSPHO1Q8TCT1 267 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PROX1Q92786 737 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SLC47A1Q96FL8 570 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ABHD17AQ96GS6 310 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 DHRS1Q96LJ7 313 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 GNRHR2Q96P88 292 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 UCN2Q96RP3 112 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 MCHR1Q99705 422 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 NPAS1Q99742 590 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PRSS27Q9BQR3 290 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 HES7Q9BYE0 225 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 DSN1Q9H410 356 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 PRORYQ9H606 182 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ARMC7Q9H6L4 198 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 DCLRE1BQ9H816 532 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 EVA1AQ9H8M9 152 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 NMNAT1Q9HAN9 279 aaPredicted RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 EXOSC3Q9NQT5 275 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 SDHAF3Q9NRP4 125 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 HPF1Q9NWY4 346 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 VNN3Q9NY84 501 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 GPR83Q9NYM4 423 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 MED11Q9P086 117 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 STX18Q9P2W9 335 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 DNAJB9Q9UBS3 223 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 RIMS3Q9UJD0 308 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 ABCG2Q9UNQ0 655 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SLC35A3Q9Y2D2 325 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 MRPS18CQ9Y3D5 142 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 PCDHGA9Q9Y5G4 932 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 CSAG2Q9Y5P2 127 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 V9GYQ6 96 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 URB1O60287 2271 aaKnown RBP5.42□□□□□ -1.54
USP39-213ENST00000467885 NUP210LQ5VU65 1888 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 A0A0G2JMM0 328 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 A0A1W2PPB8 328 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 A0A1W2PRS3 328 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TMEM8BA6NDV4 472 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 KIR3DP1A8MWS1 328 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 H3BNH8 94 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 hCG_2039718K7EN88 272 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ETV2O00321 342 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 FAAHO00519 579 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PEX1O43933 1283 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 FMO6PO60774 539 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 CBR3O75828 277 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 NTN1O95631 604 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ATP6V1G2O95670 118 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 CST1P01037 141 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 IFNW1P05000 195 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ITGB2P05107 769 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms