RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GPR137BO60478 399 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SS18L1O75177 396 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 AP2A2O94973 939 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 C1orf105O95561 183 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 IGFBP1P08833 259 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ERGP11308 486 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 RNH1P13489 461 aaKnown RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ATP1A3P13637 1013 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF17P17021 662 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 DRD4P21917 467 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 PTAFRP25105 342 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 CCR7P32248 378 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SERPINF1P36955 418 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 HNF4AP41235 474 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 RANBP1P43487 201 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 NSFP46459 744 aaKnown RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 NDUFA8P51970 172 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SLC16A1P53985 500 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 CLDN20P56880 219 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 LCN2P80188 198 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 PPIDQ08752 370 aaKnown RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 GPS1Q13098 491 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SLC13A2Q13183 592 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ITGADQ13349 1161 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 IQCB1Q15051 598 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SLC1A5Q15758 541 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 CCDC183Q5T5S1 534 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 AVPI1Q5T686 147 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 AAGABQ6PD74 315 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 DCUN1D2Q6PH85 259 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF620Q6ZNG0 422 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SNX20Q7Z614 316 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ASPGQ86U10 573 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 LCA5Q86VQ0 697 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 FAM90A1Q86YD7 464 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 WDSUB1Q8N9V3 476 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 CAMKVQ8NCB2 501 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 MORN4Q8NDC4 146 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 OR5M1Q8NGP8 315 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 OR13C4Q8NGS5 318 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 OR8K3Q8NH51 312 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 OR52N5Q8NH56 324 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 MIPOL1Q8TD10 442 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 LKAAEAR1Q8TD35 194 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF721Q8TF20 911 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 RAD51AP1Q96B01 352 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 TMEM41AQ96HV5 264 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 RSRC1Q96IZ7 334 aaKnown RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 PBKQ96KB5 322 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 GAL3ST4Q96RP7 486 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 CHID1Q9BWS9 393 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 MMP26Q9NRE1 261 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 R3HDM2Q9Y2K5 976 aaKnown RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SIGLEC9Q9Y336 463 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF175Q9Y473 711 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 SLC22A7Q9Y694 548 aa4.17□□□□□ -1.74
SDCBP-205ENST00000447267 TET2Q6N021 2002 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-205ENST00000447267 IQCF5A8MTL0 148 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF814B7Z6K7 855 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 TP53I11O14683 189 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZIC3O60481 467 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 DEDDO75618 318 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF189O75820 626 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 URI1O94763 535 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 RPN2P04844 631 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SERPIND1P05546 499 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 NR2F6P10588 404 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ALOX12P18054 663 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ITGALP20701 1170 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CMA1P23946 247 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SYKP43405 635 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF140P52738 457 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 B3GALT5-AS1P59052 145 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 RAB8AP61006 207 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CCZ1BP86790 482 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CCZ1P86791 482 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 PIGFQ07326 219 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 EGFEM1PQ0D2K5 195 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 PNOCQ13519 176 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SNX1Q13596 522 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 HABP2Q14520 560 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 HERC3Q15034 1050 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 BCL2A1Q16548 175 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SGCBQ16585 318 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ELFN2Q5R3F8 820 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 TEX35Q5T0J7 233 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 RBM20Q5T481 1227 aaKnown RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 GPR157Q5UAW9 335 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 TTC23LQ6PF05 361 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SDCCAG8Q86SQ7 713 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 COMTD1Q86VU5 262 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SBSPONQ8IVN8 264 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SAMD14Q8IZD0 417 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CA13Q8N1Q1 262 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 RIBC1Q8N443 379 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SLC15A4Q8N697 577 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms