RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	CBFB	Q13951	182 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SEC23B	Q15437	767 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	EXT1	Q16394	746 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	GSTA3	Q16772	222 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PGS1	Q32NB8	556 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	LSM12	Q3MHD2	195 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SFT2D3	Q587I9	215 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FAM71E1	Q6IPT2	247 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SLC48A1	Q6P1K1	146 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CYP2R1	Q6VVX0	501 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MED25	Q71SY5	747 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MAVS	Q7Z434	540 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ANKRD37	Q7Z713	158 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MOGAT3	Q86VF5	341 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TICAM1	Q8IUC6	712 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KRTAP1-3	Q8IUG1	177 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SCUBE1	Q8IWY4	988 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	OR4N5	Q8IXE1	308 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MIER2	Q8N344	545 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MINDY2	Q8NBR6	621 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DNAJB14	Q8TBM8	379 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ST8SIA4	Q92187	359 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	JADE3	Q92613	823 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DPF1	Q92782	380 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DAZL	Q92904	295 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TNFRSF14	Q92956	283 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TSLP	Q969D9	159 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FAM162A	Q96A26	154 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DACT3	Q96B18	629 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	C8orf44	Q96CB5	159 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MTERF3	Q96E29	417 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FCRL1	Q96LA6	429 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	OR52B2	Q96RD2	323 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RBM4B	Q9BQ04	359 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KCNS3	Q9BQ31	491 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	EBF4	Q9BQW3	602 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RBM4	Q9BWF3	364 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	OR51V1	Q9H2C8	321 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ADAP2	Q9NPF8	381 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SLC35C2	Q9NQQ7	365 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	NECTIN3	Q9NQS3	549 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	AIG1	Q9NVV5	245 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	P4HTM	Q9NXG6	502 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ASIC5	Q9NY37	505 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	C5AR2	Q9P296	337 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ERGIC3	Q9Y282	383 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MAN2B2	Q9Y2E5	1009 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DTX4	Q9Y2E6	619 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SAMHD1	Q9Y3Z3	626 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	HS3ST3B1	Q9Y662	390 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	BPTF	Q12830	3046 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SPTB	P11277	2137 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638		A0A087WV48	116 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	LOC102723996	A0A087X1L8	192 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	MYOCOS	A0A1B0GUC4	107 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638		A0A1B0GVG6	124 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TCRBV16S1A1N1	A0A5B0	115 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FUOM	A2VDF0	154 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	OR2W5	A6NFC9	320 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CCDC154	A6NI56	674 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CENPBD1	B2RD01	187 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	C17orf105	B2RV13	164 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PRR23D1	E9PI22	279 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ZNF195	O14628	629 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SCAMP2	O15127	329 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CFLAR	O15519	480 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FGF17	O60258	216 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SUSD5	O60279	629 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CCDC22	O60826	627 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TUSC2	O75896	110 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	LINGO3	P0C6S8	592 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SLC35E2	P0CK97	266 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PRR23D2	P0DMB1	279 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CPM	P14384	443 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	AHCY	P23526	432 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TACR1	P25103	407 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ITPKB	P27987	946 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	S100A3	P33764	101 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	FEN1	P39748	380 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	BMX	P51813	675 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	PGD	P52209	483 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NCBP2	P52298	156 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	HNRNPF	P52597	415 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DIO3	P55073	304 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	NME5	P56597	212 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	KCNK10	P57789	538 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	VAMP2	P63027	116 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CXADR	P78310	365 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	SRSF3	P84103	164 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TLE3	Q04726	772 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	GLO1	Q04760	184 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	EPS8	Q12929	822 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	IL10RA	Q13651	578 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ATP1A4	Q13733	1029 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	ELAVL1	Q15717	326 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	TIGD6	Q17RP2	521 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	DEFB109B	Q30KR1	87 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	BTBD16	Q32M84	506 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	C6orf183	Q5T699	404 aa		5.71	□□□□□ -1.5
ECHDC1-208	ENST00000436638	CPTP	Q5TA50	214 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms