RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 HMG20AQ9NP66 347 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL26Q9NPH9 171 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 C2orf42Q9NWW7 574 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ERAP1Q9NZ08 941 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SPG21Q9NZD8 308 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL37Q9NZH6 218 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PKD2L2Q9NZM6 624 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RCOR3Q9P2K3 495 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MBD2Q9UBB5 411 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 UXTQ9UBK9 157 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLAGL1Q9UM63 463 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CFL2Q9Y281 166 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ERGIC3Q9Y282 383 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MFHAS1Q9Y4C4 1052 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 UBIAD1Q9Y5Z9 338 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SBF2Q86WG5 1849 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRBV2A0A0J9YWF9 115 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 EDDM13A0A1B0GTR0 161 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM8BA6NDV4 472 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 HELTA6NFD8 242 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKRD61A6NGH8 418 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 C5orf52A6NGY3 159 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKDD1BA6NHY2 528 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 A6NL46 340 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR52A4PA6NMU1 304 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ERI2A8K979 691 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GABRR3A8MPY1 467 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 HHLA1C9JL84 531 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 F8VP50 259 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GOLGA8MH3BSY2 632 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GOLGA8RI6L899 631 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF197O14709 1029 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PFDN6O15212 129 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC16A4O15374 487 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 OGG1O15527 345 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARHGEF9O43307 516 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 DCXO43602 365 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLPP2O43688 288 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 IDH3BO43837 385 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SELENOFO60613 162 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TBX19O60806 448 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 AVILO75366 819 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRCH4O75427 683 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SAP30O75446 220 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SUPT3HO75486 399 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CRTAPO75718 401 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CABYRO75952 493 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SUPT7LO94864 414 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CPNE6O95741 557 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 NDUFB10O96000 172 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASS1P00966 412 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TSHBP01222 138 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 HLA-DRAP01903 254 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT2B4P06133 528 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 IGHV4-38-2P0DP08 117 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 UMPSP11172 480 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GJA1P17302 382 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANXA7P20073 488 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PIK3R1P27986 724 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CD1BP29016 333 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 LCN1P31025 176 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 AKT2P31751 481 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SPRP35270 261 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRIM23P36406 574 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 NAMPTP43490 491 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPR4P46093 362 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 MRPL19P49406 292 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RGS19P49795 217 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CAMPP49913 170 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SERPINH1P50454 418 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 KPNA2P52292 529 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SUCLG1P53597 346 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PEX3P56589 373 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SRP54P61011 504 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 NAA20P61599 178 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RASGEF1BQ0VAM2 473 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDC20Q12834 499 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 BNIP2Q12982 314 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 MAB21L1Q13394 359 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ART3Q13508 389 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ITPK1Q13572 414 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF846Q147U1 533 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 C16orf72Q14CZ0 275 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 OXA1LQ15070 435 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMD5Q16401 504 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC36A3Q495N2 470 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 C14orf177Q52M58 125 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SPANXN3Q5MJ09 141 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SAMD4BQ5PRF9 694 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 LCN1P1Q5VSP4 162 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKRD22Q5VYY1 191 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZDHHC20Q5W0Z9 365 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SEL1L3Q68CR1 1132 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 THOC7Q6I9Y2 204 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SNRNP48Q6IEG0 339 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM53Q6P2H8 277 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CASC4Q6P4E1 433 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM182Q6ZP80 229 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CFAP77Q6ZQR2 320 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms