RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SLC11A1P49279 550 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 LUMP51884 338 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 PCGF3Q3KNV8 242 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 DEFB128Q7Z7B8 93 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 DCAF4L2Q8NA75 395 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 FBXO17Q96EF6 278 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 KLHL15Q96M94 604 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 IFT22Q9H7X7 185 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ZMAT5Q9UDW3 170 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ASB4Q9Y574 426 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 DOCK3Q8IZD9 2030 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 TRBV23OR9-2A0A075B6M9 112 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 CDHR4A6H8M9 788 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 OR14I1A6ND48 311 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 TTLL8A6PVC2 850 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 AGAP14A8MT82 685 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ERI3O43414 337 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ADRB1P08588 477 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 LAMP2P13473 410 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 GTF2F2P13984 249 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC9A5Q14940 896 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 PLEKHS1Q5SXH7 462 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 COMTD1Q86VU5 262 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 TMPRSS12Q86WS5 348 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 THAP4Q8WY91 577 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 YIPF5Q969M3 257 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 PDXPQ96GD0 296 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ZC3HAV1LQ96H79 300 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 DPYSL5Q9BPU6 564 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 CMSS1Q9BQ75 279 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 NOP16Q9Y3C1 178 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 C13orf42A0A1B0GVH6 325 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 KANTRA0A1W2PQU2 76 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 H0YIV9 168 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 RLN2P04090 185 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 NMBP08949 121 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 HOXB9P17482 250 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 CBX5P45973 191 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 AP3S2P59780 193 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 POLR2LP62875 67 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 RPE65Q16518 533 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 GXYLT1Q4G148 440 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 MPP7Q5T2T1 576 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 VASNQ6EMK4 673 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF770Q6IQ21 691 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 KCTD9Q7L273 389 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 FAM129CQ86XR2 697 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 CMIPQ8IY22 773 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 OR52H1Q8NGJ2 320 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 OR4Q3Q8NH05 313 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 OR5P2Q8WZ92 322 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 PINK1Q9BXM7 581 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC6A17Q9H1V8 727 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 ZMAT3Q9HA38 289 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 NIT2Q9NQR4 276 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 BACE2Q9Y5Z0 518 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 KCNJ13O60928 360 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 VAMP1P23763 118 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 HMGA2P52926 109 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 ARFIP1P53367 373 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 PGGHGQ32M88 737 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 RASGEF1AQ8N9B8 481 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM169Q96HH4 297 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 NKX6-2Q9C056 277 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 KCNE3Q9Y6H6 103 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 SEC61A1P61619 476 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 HLXQ14774 488 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 OR5AR1Q8NGP9 310 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 PAQR8Q8TEZ7 354 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 CD180Q99467 661 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 DPH7Q9BTV6 452 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 TCF7L1Q9HCS4 588 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 SPG21Q9NZD8 308 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 GPR55Q9Y2T6 319 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 PRELID3BQ9Y3B1 194 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 SF3B6Q9Y3B4 125 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 KCNMB2Q9Y691 235 aa14.85□□□□□ -0.03
PRPF40B-201ENST00000261897 SEC16AO15027 2179 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF623O75123 536 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 HMGN1P05114 100 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 C1SP09871 688 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 NPPBP16860 134 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 GRB14Q14449 540 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 RBM39Q14498 530 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 SMCO1Q147U7 214 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 PDSS1Q5T2R2 415 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF783Q6ZMS7 281 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ZSCAN1Q8NBB4 408 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 SYT17Q9BSW7 474 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 MED18Q9BUE0 208 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ACTR6Q9GZN1 396 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 D6RAR5 112 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 PPP1R3DO95685 299 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 FGF9P31371 208 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 AQP2P41181 271 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ZNF546Q86UE3 836 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms