RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GLOD5A6NK44 160 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2AG2A6NM03 316 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR52A4PA6NMU1 304 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 EFCAB7A8K855 629 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 E9PI62 339 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LIN7AO14910 233 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 POLR1CO15160 346 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 RAD1O60671 282 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZG16O60844 167 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 GAS8O95995 478 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC4A1P02730 911 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 MT-ND3P03897 115 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PTMAP06454 111 aaKnown RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC35G4P0C7Q5 338 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 FRMD6-AS1P0C7T7 363 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 FOXN2P32314 431 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 MAGEA6P43360 314 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LEPRP48357 1165 aaKnown RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 NPY2RP49146 381 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ATP12AP54707 1039 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 GFERP55789 205 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 GNB1P62873 340 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCZ1BP86790 482 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCZ1P86791 482 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ACY1Q03154 408 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LGALS3BPQ08380 585 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 NFE2L1Q14494 772 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PTPRCAPQ14761 206 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 RPS6KA1Q15418 735 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LINC00303Q3SY05 128 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LYPLAL1Q5VWZ2 237 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ARHGAP11AQ6P4F7 1023 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 NLRP9Q7RTR0 991 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SERPINA9Q86WD7 417 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OOSP2Q86WS3 158 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF843Q8N446 348 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 DNAJC22Q8N4W6 341 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PPFIBP2Q8ND30 876 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR52K1Q8NGK4 314 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR5M8Q8NGP6 311 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR13J1Q8NGT2 312 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 HSD17B8Q92506 261 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 LPGAT1Q92604 370 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMCO6Q96DC7 493 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CXorf40BQ96DE9 158 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 DCUN1D1Q96GG9 259 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 DNAJC1Q96KC8 554 aaKnown RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ALS2CR12Q96Q35 445 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 APOL2Q9BQE5 337 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 BTBD10Q9BSF8 475 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CARD6Q9BX69 1037 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PITPNM3Q9BZ71 974 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 VN1R1Q9GZP7 353 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CHRNA10Q9GZZ6 450 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR52A5Q9H2C5 316 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 ADNPQ9H2P0 1102 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 COG4Q9H9E3 785 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 MRM3Q9HC36 420 aaKnown RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 APMAPQ9HDC9 416 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PAK5Q9P286 719 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC24A2Q9UI40 661 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 CRLS1Q9UJA2 301 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 RPS6KA6Q9UK32 745 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 POMT2Q9UKY4 750 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 GUCA1BQ9UMX6 200 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 BTRCQ9Y297 605 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 PTPN13Q12923 2485 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SCN2AQ99250 2005 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SHANK1Q9Y566 2161 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRRC2CQ9Y520 2896 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGHV5-51A0A0C4DH38 117 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LOC101059948A0A1B0GTJ6 334 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAGEB16A2A368 324 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 HYKKA2RU49 373 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC162PA2VCL2 907 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANKUB1A6NFN9 424 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 A8MU76 341 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 C21orf140B9A014 251 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPAG6O75602 509 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 STK17BO94768 372 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLCO2B1O94956 709 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 FGGP02679 453 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 APOHP02749 345 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 FTH1P02794 183 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 APRTP07741 180 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR56A5P0C7T3 313 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 GNB3P16520 340 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TPSB2P20231 275 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 RPS3P23396 243 aaKnown RBP eCLIP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ITGA3P26006 1051 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 MSNP26038 577 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 CEACAM8P31997 349 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 RPL22P35268 128 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRIA1P42261 906 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TTPAP49638 278 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ADARP55265 1226 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SRSF6Q13247 344 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TUBB2AQ13885 445 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms