RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ELP5Q8TE02 316 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 GTF2H4Q92759 462 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 PPWD1Q96BP3 646 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 NEURL3Q96EH8 262 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 VMP1Q96GC9 406 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MS4A4EQ96PG1 132 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SH3GL1Q99961 368 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 EFCAB1Q9HAE3 211 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MMP25Q9NPA2 562 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 PNO1Q9NRX1 252 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 DDX18Q9NVP1 670 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 THUMPD1Q9NXG2 353 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 GIN1Q9NXP7 522 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 NDE1Q9NXR1 346 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MAT2BQ9NZL9 334 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 PRODH2Q9UF12 536 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 C19orf53Q9UNZ5 99 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CORO2BQ9UQ03 480 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 POLHQ9Y253 713 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CFL2Q9Y281 166 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 AP3M1Q9Y2T2 418 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 IGF2RP11717 2491 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 AHCTF1Q8WYP5 2266 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FER1L5A0AVI2 2057 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 TRBV5-3A0A0A0MS03 114 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 C15orf38-AP3S2A0A0A6YYH1 394 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CCT8L1PA6NM43 557 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 C9JVG2 144 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 E9PLN8 166 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 K7ENP7 123 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 MASP2O00187 686 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 UPK1AO00322 258 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FBP2O00757 339 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ACOX3O15254 700 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 NKX2-8O15522 239 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ASNA1O43681 348 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ZFAND5O76080 213 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 KRT75O95678 551 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 C6orf47O95873 294 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 AGR2O95994 175 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ABCB1P08183 1280 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 HOXB9P17482 250 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 WT1P19544 449 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DRD5P21918 477 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CALB2P22676 271 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 PPICP45877 212 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CCT3P49368 545 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CDK9P50750 372 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CLCN2P51788 898 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 PGDP52209 483 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FOXL2P58012 376 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 RPS7P62081 194 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CBX1P83916 185 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 EEF1A2Q05639 463 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CHAF1BQ13112 559 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF267Q14586 743 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ZNHIT3Q15649 155 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 LTB4RQ15722 352 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 BTBD16Q32M84 506 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 MMEL1Q495T6 779 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 C6orf10Q5SRN2 563 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FAM69BQ5VUD6 431 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 IRAK1BP1Q5VVH5 260 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 AP1ARQ63HQ0 302 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SAXO2Q658L1 398 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 H3F3CQ6NXT2 135 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 INO80CQ6PI98 192 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 TMEM107Q6UX40 140 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DLEU7Q6UYE1 221 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DGAT2L6Q6ZPD8 337 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SLC29A4Q7RTT9 530 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ARPINQ7Z6K5 226 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ANKRD46Q86W74 232 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DND1Q8IYX4 353 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CLECL1Q8IZS7 167 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SLC5A8Q8N695 610 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CDRT4Q8N9R6 151 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 APCDD1LQ8NCL9 501 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 OR7G2Q8NG99 324 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 OR8J3Q8NGG0 315 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 NUBPLQ8TB37 319 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF721Q8TF20 911 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 C8orf44Q96CB5 159 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 FAM120BQ96EK7 910 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 VSTM2LQ96N03 204 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 BTBD9Q96Q07 612 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 HOPXQ9BPY8 73 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 INPP5KQ9BT40 448 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CNPPD1Q9BV87 410 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 TRIM4Q9C037 500 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 OR8D2Q9GZM6 311 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 PAIP1Q9H074 479 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 RAD21L1Q9H4I0 556 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 CXorf36Q9H7Y0 433 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms