RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GPR55Q9Y2T6 319 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-214ENST00000495485 B3GALT1Q9Y5Z6 326 aa9.48□□□□□ -0.89
HDAC3-214ENST00000495485 MGAQ8IWI9 3026 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 CNTRLQ7Z7A1 2325 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 TRBV4-1A0A0J9YWV2 114 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 A0A1W2PNU3 283 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 GXYLT2A0PJZ3 443 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 C21orf140B9A014 251 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 C9orf172C9J069 976 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 M0R3G1 203 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SLC1A7O00341 560 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SCDO00767 359 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 FAM20BO75063 409 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 STK17BO94768 372 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 IL33O95760 270 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 DLGAP3O95886 979 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 TFAP2AP05549 437 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ZGLP1P0C6A0 271 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 POU2F1P14859 743 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ITIH1P19827 911 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SPINK2P20155 84 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ELK4P28324 431 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 IL12BP29460 328 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SOX18P35713 384 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ADH7P40394 386 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 STAT5AP42229 794 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SMSP52788 366 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 CLDN6P56747 220 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SLC37A1P57057 533 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 MVKQ03426 396 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 TSPAN31Q12999 210 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 FGFBP1Q14512 234 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 MAD2L1BPQ15013 274 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 PTGES3Q15185 160 aaKnown RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 PGBD2Q6P3X8 592 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 KLHL17Q6TDP4 642 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 DGAT2L6Q6ZPD8 337 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 OVCH1Q7RTY7 1134 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 DTX1Q86Y01 620 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 RBM45Q8IUH3 476 aaKnown RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 LACC1Q8IV20 430 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 CLIP4Q8N3C7 705 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF614Q8N883 585 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 BCORP1Q8N888 145 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF540Q8NDQ6 660 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 BPIFB6Q8NFQ5 453 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 OR4D11Q8NGI4 311 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 OR1N1Q8NGS0 311 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 TEX47Q8TBZ9 253 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 STT3BQ8TCJ2 826 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SLC7A13Q8TCU3 470 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SLC2A12Q8TD20 617 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 KCNE4Q8WWG9 221 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ZCCHC14Q8WYQ9 949 aaKnown RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 DIO2Q92813 273 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 OSTF1Q92882 214 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 KIAA1143Q96AT1 154 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ZG16BQ96DA0 208 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 MPP4Q96JB8 637 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 NODALQ96S42 347 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ULBP3Q9BZM4 244 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 OR8D2Q9GZM6 311 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 VN1R1Q9GZP7 353 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 PLCXD1Q9NUJ7 323 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 PCDHGB5Q9Y5G0 923 aa9.47□□□□□ -0.89
HDAC3-214ENST00000495485 ITPR1Q14643 2758 aa9.46□□□□□ -0.89
HDAC3-214ENST00000495485 A0A087WV48 116 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 IRGMA1A4Y4 181 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZAR1LA6NP61 321 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 A8MUA0 341 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 C9J4A7 227 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 GTPBP1O00178 669 aaKnown RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 EPPINO95925 133 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CSTAP01040 98 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CT45A8P0DMV1 189 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CT45A9P0DMV2 189 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 JUNBP17275 347 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 POU1F1P28069 291 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 POLR2IP36954 125 aaKnown RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ETV5P41161 510 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 RBM34P42696 430 aaKnown RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ALDH3B2P48448 385 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 IDH2P48735 452 aaKnown RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 EMP2P54851 167 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 OR1Q1Q15612 314 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 TMEM44Q2T9K0 475 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZBED5Q49AG3 693 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CT45A2Q5DJT8 189 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 VWA2Q5GFL6 755 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 PDZK1Q5T2W1 519 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 MEDAGQ5VYS4 303 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF770Q6IQ21 691 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 C6orf15Q6UXA7 325 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF517Q6ZMY9 492 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 RASSF6Q6ZTQ3 369 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 PTCHD4Q6ZW05 846 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 MBOAT2Q6ZWT7 520 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms