RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 CRLS1Q9UJA2 301 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 ACAD8Q9UKU7 415 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 SNX7Q9UNH6 387 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 SH3GLB1Q9Y371 365 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 MMP24Q9Y5R2 645 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 ALG6Q9Y672 507 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 MRPS18BQ9Y676 258 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 ARID1AO14497 2285 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 LRP4O75096 1905 aa3.79□□□□□ -1.8
GTF3C3-207ENST00000451088 hCG_1818297A0A087WSY0 165 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 A0A1B0GU03 582 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 GSAPA4D1B5 854 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 OR6C74A6NCV1 312 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 OR2AG2A6NM03 316 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PSMD3O43242 534 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 DPM1O60762 260 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SMIM24O75264 130 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 JRKO75564 520 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SCRG1O75711 98 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SEC14L2O76054 403 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PDE9AO76083 593 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SRP72O76094 671 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 AP2A2O94973 939 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 FTH1P02794 183 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 RPN2P04844 631 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 EIF2S1P05198 315 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 GSTA2P09210 222 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ERVK-10P10266 1014 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ATP1B2P14415 290 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CDH3P22223 829 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 F8A1P23610 371 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 HTR1EP28566 365 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PBLDP30039 288 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CLK1P49759 484 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ZNF75DP51815 510 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CCNG1P51959 295 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 GNB1P62873 340 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 WASHC5Q12768 1159 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 COX10Q12887 443 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 IHHQ14623 411 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CHRNA6Q15825 494 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 BCL2A1Q16548 175 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 VWA2Q5GFL6 755 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 LYPLAL1Q5VWZ2 237 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PWWP2BQ6NUJ5 590 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 KDELC1Q6UW63 502 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 Q75L30 129 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 NLRP9Q7RTR0 991 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 NANOGNBQ7Z5D8 188 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SNX20Q7Z614 316 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM135Q86UB9 458 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 RAB43Q86YS6 212 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SYCE1Q8N0S2 351 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ZNF567Q8N184 647 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 UBL4BQ8N7F7 174 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 STPG4Q8N801 248 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 RASGEF1AQ8N9B8 481 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 OR4K2Q8NGD2 314 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CT55Q8WUE5 264 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 FCAMRQ8WWV6 532 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 IFT81Q8WYA0 676 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM190Q8WZ59 177 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 MR1Q95460 341 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PHF21AQ96BD5 680 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ELMO2Q96JJ3 720 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SMIM14Q96QK8 99 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC25A23Q9BV35 468 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TSSK1BQ9BXA7 367 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 NLNQ9BYT8 704 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 WWP1Q9H0M0 922 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 LRMDAQ9H2I8 198 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SRMSQ9H3Y6 488 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ASB8Q9H765 288 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 LRRC40Q9H9A6 602 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 CHST11Q9NPF2 352 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TRMT1Q9NXH9 659 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC23A2Q9UGH3 650 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 TMCC3Q9ULS5 477 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PRELID1Q9Y255 219 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 FARSAQ9Y285 508 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 BTRCQ9Y297 605 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 RPH3AQ9Y2J0 694 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 C15orf41Q9Y2V0 281 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 PCYT1BQ9Y5K3 369 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 KLF2Q9Y5W3 355 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 AP1M2Q9Y6Q5 423 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 MAU2Q9Y6X3 613 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 MXRA5Q9NR99 2828 aa3.78□□□□□ -1.8
GTF3C3-207ENST00000451088 ANKRD36A6QL64 1941 aa3.78□□□□□ -1.81
GTF3C3-207ENST00000451088 TGP01266 2768 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 IGHV5-51A0A0C4DH38 117 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 A0A1W2PPI3 338 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 SLC9B1P1A6NJY1 282 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 ERI2A8K979 691 aaKnown RBP3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 BTNL10A8MVZ5 291 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 C2orf74A8MZ97 194 aa3.77□□□□□ -1.81
GTF3C3-207ENST00000451088 MIF4GDA9UHW6 222 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms