RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TCRBV3S1A0A5B6 114 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR2M5A3KFT3 312 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ISPDA4D126 451 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR2AG2A6NM03 316 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR5K4A6NMS3 321 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 BBIP1A8MTZ0 92 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CENPBD1B2RD01 187 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM178BH3BS89 294 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 H3BSA7 217 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 J3QR06 171 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TLR4O00206 839 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 FBP2O00757 339 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TXNDC9O14530 226 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRRG1O14668 218 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TEX28O15482 410 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CST8O60676 142 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MRPS14O60783 128 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 B4GALT2O60909 372 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TGM6O95932 706 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GSRP00390 522 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RETP07949 1114 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OCM2P0CE71 109 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OCMP0CE72 109 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZSCAN5DPP0CG00 497 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRSS56P0CW18 603 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ETS2P15036 469 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CYP2F1P24903 491 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 OTX2P32243 289 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SOAT1P35610 550 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC26A2P50443 739 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ATP4BP51164 291 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SUOXP51687 545 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPR143P51810 404 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 AIF1P55008 147 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 YWHAGP61981 247 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GNB1P62873 340 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC25A11Q02978 314 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MBTD1Q05BQ5 628 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MZT1Q08AG7 82 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRKAA1Q13131 559 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 KRR1Q13601 381 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TGFBIQ15582 683 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MPPE1Q53F39 396 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 HIKESHIQ53FT3 197 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 COQ5Q5HYK3 327 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GCNT6Q5T4J0 391 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARMC12Q5T9G4 340 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ACSM2BQ68CK6 577 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM45BPQ6NSW5 357 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PMF1Q6P1K2 205 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRMT9Q6P2P2 845 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RBMS3Q6XE24 437 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SCARA5Q6ZMJ2 495 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MACC1Q6ZN28 852 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDHR3Q6ZTQ4 885 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF534Q76KX8 674 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRC70Q7Z2Q7 622 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RTN4RL2Q86UN3 420 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SERINC5Q86VE9 423 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CBWD2Q8IUF1 395 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDKL3Q8IVW4 592 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 AQP12AQ8IXF9 295 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CFAP206Q8IYR0 622 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PYROXD2Q8N2H3 581 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 C1orf52Q8N6N3 182 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SNX31Q8N9S9 440 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CLEC1AQ8NC01 280 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 HJURPQ8NCD3 748 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRPV1Q8NER1 839 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 BPIFCQ8NFQ6 507 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM45AQ8TCE6 357 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GIPC3Q8TF64 312 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RAB2BQ8WUD1 216 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PTPMT1Q8WUK0 201 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SMPDL3BQ92485 455 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC127Q96BQ5 260 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ROPN1LQ96C74 230 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ISOC1Q96CN7 298 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RASD2Q96D21 266 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ERLEC1Q96DZ1 483 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKRD36BP1Q96IX9 119 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLEKHA8Q96JA3 519 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 NSMCE2Q96MF7 247 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF558Q96NG5 402 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 RDH12Q96NR8 316 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 CPNE1Q99829 537 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SSX3Q99909 188 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 PIGQQ9BRB3 760 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 C9orf16Q9BUW7 83 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF416Q9BWM5 594 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 MROQ9BYG7 248 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ILKAPQ9H0C8 392 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SDCBP2Q9H190 292 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 SNX25Q9H3E2 840 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF385DQ9H6B1 395 aa3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 APOBEC3GQ9HC16 384 aaKnown RBP3.31□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPN1Q9HCN4 374 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms