RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ZNF749O43361 778 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DUSP11O75319 330 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF189O75820 626 aaPredicted RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ECDO95905 644 aaPredicted RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MBD3O95983 291 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRAPPC2P0DI81 140 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRAPPC2BP0DI82 140 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPL4P36578 427 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TALDO1P37837 337 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DCTP40126 519 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMED10P49755 219 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TIMM10P62072 90 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ENPEPQ07075 957 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CTU2Q2VPK5 515 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 GSG1LQ6UXU4 331 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CYHR1Q6ZMK1 362 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RBM44Q6ZP01 1051 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TTLL10Q6ZVT0 673 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TAS2R42Q7RTR8 314 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MARCH9Q86YJ5 346 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CBLN2Q8IUK8 224 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 PIANPQ8IYJ0 282 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 C10orf82Q8WW14 230 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM210BQ96KR6 192 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 FYTTD1Q96QD9 318 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CHP1Q99653 195 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MAP1LC3CQ9BXW4 147 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TOLLIPQ9H0E2 274 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 GAREM1Q9H706 876 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACTR5Q9H9F9 607 aaPredicted RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 SSU72Q9NP77 194 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CNNM1Q9NRU3 951 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 PILRAQ9UKJ1 303 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 EIF3LQ9Y262 564 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRAPPC4Q9Y296 219 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MRPS7Q9Y2R9 242 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLCO1B1Q9Y6L6 691 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 LOC390937A0A1W2PQ73 354 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 GOLGA6L9A6NEM1 432 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 LEUTXA8MZ59 168 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 GOLGA6L19H0YKK7 550 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DNASE2O00115 360 aaPredicted RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CYP26A1O43174 497 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 SNX3O60493 162 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 UGT1A6P19224 532 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 PGCP20142 388 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TACR3P29371 465 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 FDFT1P37268 417 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 USP8P40818 1118 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 KLF5Q13887 457 aaPredicted RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 GPR176Q14439 515 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 KCNJ8Q15842 424 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ETFDHQ16134 617 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 STX1AQ16623 288 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 Q4G0T1 1027 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 PABPC1L2AQ5JQF8 200 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 TIGD3Q6B0B8 471 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 THOC7Q6I9Y2 204 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RWDD4Q6NW29 188 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 Q6ZT83 130 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DET1Q7L5Y6 550 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRSS48Q7RTY5 328 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF677Q86XU0 584 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CLHC1Q8NHS4 586 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 THAP6Q8TBB0 222 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 NSMCE1Q8WV22 266 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RORBQ92753 470 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPGRIP1Q96KN7 1286 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 HRASLS5Q96KN8 279 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 C9orf16Q9BUW7 83 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DUSP26Q9BV47 211 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 RIBC2Q9H4K1 309 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 CUTCQ9NTM9 273 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 STX18Q9P2W9 335 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 DCDC2Q9UHG0 476 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 MRM2Q9UI43 246 aaKnown RBP1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 HSPE1-MOB4S4R3N1 261 aa1.59□□□□□ -2.15
SMARCAD1-202ENST00000359052 UBR5O95071 2799 aaPredicted RBP1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 THADAQ6YHU6 1953 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 KLLNB2CW77 178 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 DIRC3C9JPN6 131 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPIAL4DF5H284 164 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 EIF3DO15371 548 aaKnown RBP eCLIP1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 NUAK1O60285 661 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 STX10O60499 249 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 UGT2B17O75795 530 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 MYO1DO94832 1006 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 SEC24AO95486 1093 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPP1R3DO95685 299 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 SEMG1P04279 462 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 HOXC6P09630 235 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM225BP0DP42 221 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 PPP3CBP16298 524 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 CSRP1P21291 193 aaKnown RBP1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 PTGER1P34995 402 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 CRATP43155 626 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 MAGEA12P43365 314 aa1.59□□□□□ -2.16
SMARCAD1-202ENST00000359052 UGT2B15P54855 530 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms