RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC35A3Q9Y2D2 325 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 CARD8Q9Y2G2 431 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 CD8B2A6NJW9 211 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 FCMRO60667 390 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 CSTAP01040 98 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF708P17019 499 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 EIF1P41567 113 aaKnown RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 STARP49675 285 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 RNF144AP50876 292 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 B3GALT5-AS1P59052 145 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 RPS3AP61247 264 aaKnown RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 FADDQ13158 208 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 CBFBQ13951 182 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 NSUN5P2Q63ZY6 315 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 TYW3Q6IPR3 259 aaKnown RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 ARSKQ6UWY0 536 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 LRRC74BQ6ZQY2 392 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 FUNDC1Q8IVP5 155 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 UBQLNLQ8IYU4 475 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 GTPBP8Q8N3Z3 284 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 SMPDL3BQ92485 455 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 PAIP1Q9H074 479 aaKnown RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 SLC6A13Q9NSD5 602 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 MED17Q9NVC6 651 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 LEF1Q9UJU2 399 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 CORO2BQ9UQ03 480 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 PCDHB14Q9Y5E9 798 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 AP4B1Q9Y6B7 739 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 SETXQ7Z333 2677 aaKnown RBP17.36■□□□□ 0.37
SYNE4-202ENST00000340477 CACNA1CQ13936 2221 aa17.36■□□□□ 0.37
SYNE4-202ENST00000340477 MED12Q93074 2177 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 A0A1W2PP18 115 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 C7orf72A4D263 438 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 FAM90A27PA6NNH2 459 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 SEC14L5O43304 696 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 UGT2B17O75795 530 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 CYP7B1O75881 506 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 CAPN3P20807 821 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 CRISP3P54108 245 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 CLDN18P56856 261 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 FUT5Q11128 374 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 PLPPR5Q32ZL2 321 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 GTDC1Q4AE62 458 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 COX20Q5RI15 118 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 FRRS1Q6ZNA5 592 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 GRAMD2AQ8IUY3 354 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 CCDC71Q8IV32 467 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-202ENST00000340477 ANKFN1Q8N957 763 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 OR5M1Q8NGP8 315 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 PMM1Q92871 262 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 AURKBQ96GD4 344 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-202ENST00000340477 TM9SF2Q99805 663 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 TUBA1CQ9BQE3 449 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 SAP130Q9H0E3 1048 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 RUBCNLQ9H714 662 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 KCNJ16Q9NPI9 418 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-202ENST00000340477 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-202ENST00000340477 NDUFAF1Q9Y375 327 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF337Q9Y3M9 751 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 PCNX3Q9H6A9 2034 aa17.35■□□□□ 0.37
SYNE4-202ENST00000340477 A0A0G2JNJ9 132 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 CLCA1A8K7I4 914 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 CLIC1O00299 241 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 DVL2O14641 736 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 ETFAP13804 333 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 TIMP3P35625 211 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 CHRNEQ04844 493 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 FGFBP1Q14512 234 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 SYPL1Q16563 259 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 LRIF1Q5T3J3 769 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 OLIG3Q7RTU3 272 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 P4HA3Q7Z4N8 544 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 PEX5LQ8IYB4 626 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 OR5W2Q8NH69 310 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 LILRB4Q8NHJ6 448 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 TSPEARQ8WU66 669 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 LRRC46Q96FV0 321 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 RNF145Q96MT1 663 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 ZFP3Q96NJ6 502 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 LAT2Q9GZY6 243 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 Q9UFV3 132 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
SYNE4-202ENST00000340477 GPC6Q9Y625 555 aaPredicted RBP17.34■□□□□ 0.37
SYNE4-202ENST00000340477 MBD3L4A6NDZ8 208 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-202ENST00000340477 MBD3L3A6NE82 208 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-202ENST00000340477 MBD3L5A6NJ08 208 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-202ENST00000340477 EVPLLA8MZ36 301 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 C5orf58C9J3I9 102 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 BCHEP06276 602 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 DBIP07108 87 aaKnown RBP17.33■□□□□ 0.36
SYNE4-202ENST00000340477 UBTFL6P0CB48 400 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-202ENST00000340477 PGCP20142 388 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 ELK4P28324 431 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 ADH7P40394 386 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 MAPRE2Q15555 327 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 SLC25A35Q3KQZ1 300 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 CBLN3Q6UW01 205 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 CMIPQ8IY22 773 aa17.33■□□□□ 0.36
SYNE4-202ENST00000340477 MBD3L2Q8NHZ7 208 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms