RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Defb41Q30KP6 65 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dsg1cQ7TSF0 911 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 ChdhQ8BJ64 596 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Arrb1Q8BWG8 418 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ppp1r3bQ8C767 284 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 D2hgdhQ8CIM3 535 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gpr1Q8K087 353 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Asb2Q8K0L0 634 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc16a14Q8K1C7 512 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Edem1Q925U4 652 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cstf1Q99LC2 431 aaKnown RBP13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Acss1Q99NB1 682 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Uck2Q99PM9 261 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc25a30Q9CR58 291 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Maf1Q9D0U6 258 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Snx5Q9D8U8 404 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Spata19Q9DAQ9 154 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nudt22Q9DD16 308 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Il17bQ9QXT6 180 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Kcne3Q9WTW2 103 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Bod1lE9Q6J5 3032 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ankrd12G5E893 2041 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tnfrsf25B1AWN9 411 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp40B1B1D3 796 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Znf382B2RXC5 579 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Arhgap40E9Q6X9 672 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lancl1O89112 399 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Sod1P08228 154 aaKnown RBP13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Uck1P52623 277 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dmrtc1bQ2PMX6 267 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mfsd12Q3U481 476 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 CmahQ61419 577 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cd55Q61475 390 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Drd1Q61616 446 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cramp1Q6PG95 1285 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Morn4Q6PGF2 146 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr728Q7TRM6 311 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr684Q7TRN8 312 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Btnl1Q7TST0 509 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Znf322Q8BZ89 410 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cpne1Q8C166 536 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr849Q8VFF6 312 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr522Q8VGL1 312 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Wdr45Q91VM3 360 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc22a7Q91WU2 540 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lrrc49Q91YK0 686 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dusp7Q91Z46 422 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tmem186Q9CR76 216 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 2610042L04RikQ9D073 150 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Phf6Q9D4J7 364 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Wwp2Q9DBH0 870 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slco2a1Q9EPT5 643 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Padi4Q9Z183 666 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm3752A6NAT4 150 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zar1lC3VD30 291 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp945E9PYM8 794 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pgbd1E9Q492 415 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 3110082J24RikF6Z6Z2 108 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10479K7N6H4 105 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn1r175K7N6T9 304 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mknk1O08605 427 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pmm1O35621 262 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fcgr2P08101 330 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fabp3P11404 133 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 ChrneP20782 493 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pcsk4P29121 655 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gabarapl2P60521 117 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Igfbp5Q07079 271 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gdpgp1Q3TLS3 386 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cdv3Q4VAA2 281 aaKnown RBP13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Znf488Q5HZG9 337 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Kyat3Q71RI9 455 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r81Q80Z09 865 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 TxlngQ8BHN1 524 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc35b4Q8CIA5 331 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mchr1Q8JZL2 353 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cables2Q8K3M5 476 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fndc5Q8K4Z2 209 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr165Q8VFA2 313 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10762Q9CZN6 115 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 S100a14Q9D2Q8 104 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Srxn1Q9D975 136 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pla2g12aQ9EPR2 192 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Phc2Q9QWH1 850 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 SpegQ62407 3262 aa13.74□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn1r16K7N775 303 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r13L7N1X2 831 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fabp1P12710 127 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hmgn1P18608 96 aaKnown RBP13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mmp2P33434 662 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 HccsP53702 272 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp39Q02525 718 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hddc2Q3SXD3 199 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mef2aQ60929 498 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Grm7Q68ED2 915 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Galnt2Q6PB93 570 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lrit2Q6PFC5 549 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Myl12aQ6ZWQ9 172 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr1065Q7TR70 313 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr301Q7TS04 311 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms