RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 SERPINE1P05121 402 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 CD8BP10966 210 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 ATP6V1C1P21283 382 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 EIF1P41567 113 aaKnown RBP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 KIR2DL2P43627 348 aaPredicted RBP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 RAC1P63000 192 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 LASP1Q14847 261 aaKnown RBP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 PON3Q15166 354 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 CROCCP2Q86T23 111 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 FBXO30Q8TB52 745 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 ADAMTS15Q8TE58 950 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 FIG4Q92562 907 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 CHMP6Q96FZ7 201 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 PGM2Q96G03 612 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 ZNF845Q96IR2 970 aaPredicted RBP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 C1orf50Q9BV19 199 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 VDAC3Q9Y277 283 aa17.16■□□□□ 0.34
CCDC28A-203ENST00000617445 H0YC42 278 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 H3BNH8 94 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 TUBBP07437 444 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 MYZAPP0CAP1 466 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 EFNA1P20827 205 aaPredicted RBP17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 ME2P23368 584 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 CD79BP40259 229 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 TPD52P55327 224 aaPredicted RBP17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 CLDN8P56748 225 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 SPDYE7PQ495Y7 208 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 PAMR1Q6UXH9 720 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 BTLAQ7Z6A9 289 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 GALNT10Q86SR1 603 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 GGNQ86UU5 652 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 B4GALNT2Q8NHY0 566 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 FNDC9Q8TBE3 224 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 ALPK1Q96QP1 1244 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 DUSP26Q9BV47 211 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 PARD6BQ9BYG5 372 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 LIME1Q9H400 295 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 MED17Q9NVC6 651 aa17.15■□□□□ 0.34
CCDC28A-203ENST00000617445 ADAMDEC1O15204 470 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 GMFGO60234 142 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 C6orf47O95873 294 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 RAF1P04049 648 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 HRGP04196 525 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 G6PDP11413 515 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 CPOXP36551 454 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 ZNF844Q08AG5 666 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 TP53BP2Q13625 1128 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 PLPPR5Q32ZL2 321 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 PDSS1Q5T2R2 415 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 VWA1Q6PCB0 445 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 ESPNLQ6ZVH7 1005 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 FAM214BQ7L5A3 538 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 ZAR1Q86SH2 424 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 KRTCAP2Q8N6L1 136 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 GATSQ8NAP1 163 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 CDS1Q92903 461 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 PRRG4Q9BZD6 226 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 CXorf36Q9H7Y0 433 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 PLEKHF2Q9H8W4 249 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 GLRX2Q9NS18 164 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 GPATCH2Q9NW75 528 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 FBXO34Q9NWN3 711 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 MCTS1Q9ULC4 181 aaKnown RBP17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 PLEKHA6Q9Y2H5 1048 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 RAP2CQ9Y3L5 183 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 TESMINQ9Y4I5 508 aa17.14■□□□□ 0.33
CCDC28A-203ENST00000617445 DUXAA6NLW8 204 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 EIF1AYO14602 144 aaKnown RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 CFLARO15519 480 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 CGAP01215 116 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 PSMA4P25789 261 aaKnown RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 ADH6P28332 368 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 EIF1AXP47813 144 aaKnown RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 SUMO3P55854 103 aaPredicted RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 ABCE1P61221 599 aaKnown RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 GUSBP1Q15486 140 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 CHI3L2Q15782 390 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 KLHL26Q53HC5 615 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 CCNJQ5T5M9 372 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 ZNF226Q9NYT6 803 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 PROCRQ9UNN8 238 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 EMC9Q9Y3B6 208 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 ACTL7BQ9Y614 415 aa17.13■□□□□ 0.33
CCDC28A-203ENST00000617445 SHISA8B8ZZ34 492 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 C16orf97H3BN30 126 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 SYNGR4O95473 234 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 DHRS4L1P0CG22 281 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 POU2F1P14859 743 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 IL11P20809 199 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 ELK4P28324 431 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 RPL14P50914 215 aaKnown RBP17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 ATP12AP54707 1039 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 FAM27E3Q08E93 113 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 KEAP1Q14145 624 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 DCST2Q5T1A1 773 aa17.12■□□□□ 0.33
CCDC28A-203ENST00000617445 GTF2IRD2BQ6EKJ0 949 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms