RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	APMAP	Q9HDC9	416 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	TIGAR	Q9NQ88	270 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF581	Q9P0T4	197 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	LCMT1	Q9UIC8	334 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	PTBP2	Q9UKA9	531 aa	Known RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	HPCAL4	Q9UM19	191 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	RRP15	Q9Y3B9	282 aa	Known RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	FRMPD4	Q14CM0	1322 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	TRAV9-2	A0A087WT02	112 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	METTL21EP	A6NDL7	271 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF840P	A6NDX5	716 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	FAM220BP	B1ANY3	271 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	NPIPA7	E9PJI5	369 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SLC17A2	O00624	439 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	CXCL11	O14625	94 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PRRG1	O14668	218 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	NUDT21	O43809	227 aa	Known RBP	3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PALM	O75781	387 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	GJB5	O95377	273 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	NPIPA8	P0DM63	369 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	CT45A10	P0DMU9	189 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	LAMP1	P11279	417 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	DHPS	P49366	369 aa	Predicted RBP	3.09	□□□□□ -1.91
RDX-208	ENST00000530085	AP3M2	P53677	418 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	AIF1	P55008	147 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	RND3	P61587	244 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PEX6	Q13608	980 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	MXD4	Q14582	209 aa	Predicted RBP	3.09	□□□□□ -1.91
RDX-208	ENST00000530085	KCNJ11	Q14654	390 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PDK3	Q15120	406 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SLC5A12	Q1EHB4	618 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	TEX44	Q53QW1	395 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	C10orf120	Q5SQS8	335 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PVRIG	Q6DKI7	326 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	TMEM225	Q6GV28	225 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	ACSM5	Q6NUN0	579 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PMF1	Q6P1K2	205 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	STXBP4	Q6ZWJ1	553 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	VSTM4	Q8IW00	320 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	LINC01561	Q8N1V8	128 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	CSNK1A1L	Q8N752	337 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	OR9A4	Q8NGU2	314 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PIGC	Q92535	297 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	TOMM40L	Q969M1	308 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SLC41A3	Q96GZ6	507 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PPP1R16A	Q96I34	528 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SECISBP2	Q96T21	854 aa	Known RBP	3.09	□□□□□ -1.91
RDX-208	ENST00000530085	TM2D1	Q9BX74	207 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	PIPOX	Q9P0Z9	390 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF221	Q9UK13	617 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	CLEC4A	Q9UMR7	237 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	NPIPA1	Q9UND3	350 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	RPH3AL	Q9UNE2	315 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	RABL2B	Q9UNT1	228 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	ASB3	Q9Y575	518 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SLCO1B1	Q9Y6L6	691 aa		3.09	□□□□□ -1.91
RDX-208	ENST00000530085	SNED1	Q8TER0	1413 aa		3.09	□□□□□ -1.92
RDX-208	ENST00000530085	PCNX3	Q9H6A9	2034 aa		3.09	□□□□□ -1.92
RDX-208	ENST00000530085	KIF26B	Q2KJY2	2108 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	SAGE2P	A6NJ88	616 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	EFCAB7	A8K855	629 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	OR7A17	O14581	309 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	MSH4	O15457	936 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	TPST2	O60704	377 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	ZNF253	O75346	499 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	SNX4	O95219	450 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	SLC2A10	O95528	541 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	IL1B	P01584	269 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	CAPN1	P07384	714 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	H2BFM	P0C1H6	154 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	SHC1	P29353	583 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	HPCAL1	P37235	193 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	RPL34	P49207	117 aa	Known RBP	3.08	□□□□□ -1.92
RDX-208	ENST00000530085	VEGFC	P49767	419 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	ERVPABLB-1	P60509	514 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	OTUD4	Q01804	1114 aa	Known RBP	3.08	□□□□□ -1.92
RDX-208	ENST00000530085	MAP2K1	Q02750	393 aa	Predicted RBP	3.08	□□□□□ -1.92
RDX-208	ENST00000530085	PAX2	Q02962	417 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	ST3GAL3	Q11203	375 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	LAGE3	Q14657	143 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	MESD	Q14696	234 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	SLC10A1	Q14973	349 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	NDUFA9	Q16795	377 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	EXOC3L2	Q2M3D2	409 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	RABL6	Q3YEC7	729 aa	Predicted RBP	3.08	□□□□□ -1.92
RDX-208	ENST00000530085	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.08	□□□□□ -1.92
RDX-208	ENST00000530085	KCNIP4	Q6PIL6	250 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	GCNT7	Q6ZNI0	430 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	C16orf62	Q7Z3J2	963 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	TMEM123	Q8N131	208 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	POM121L12	Q8N7R1	296 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	C15orf54	Q8N8G6	183 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	STXBP6	Q8NFX7	210 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	OR10A7	Q8NGE5	316 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	OR4D5	Q8NGN0	318 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	BAD	Q92934	168 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	PELI1	Q96FA3	418 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	FAHD2A	Q96GK7	314 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	TGM7	Q96PF1	710 aa		3.08	□□□□□ -1.92
RDX-208	ENST00000530085	ZBTB18	Q99592	522 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms