RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GKP32189 559 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 GCGRP47871 477 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 H2BFSP57053 126 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 STARD6P59095 220 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 BLOC1S1P78537 153 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 FZD5Q13467 585 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 NFATC2Q13469 925 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 IL10RAQ13651 578 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 MPPED2Q15777 294 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ENTPD8Q5MY95 495 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ACER2Q5QJU3 275 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 TAPT1Q6NXT6 567 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 PFDN5Q99471 154 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 GPR52Q9Y2T5 361 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 OR6C74A6NCV1 312 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 MGAT4DA6NG13 374 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 TMEM200CA6NKL6 621 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ANKRD66B4E2M5 251 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 SOCS7O14512 581 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 INSIG1O15503 277 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 RNF224P0DH78 156 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 CBR1P16152 277 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 SLC25A35Q3KQZ1 300 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 OLFML2AQ68BL7 652 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 CXXC5Q7LFL8 322 aaKnown RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 PRSS45Q7RTY3 260 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 NAA40Q86UY6 237 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ADGRG2Q8IZP9 1017 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 RNF175Q8N4F7 328 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 ZBED3Q96IU2 234 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 EGLN1Q9GZT9 426 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 LRFN2Q9ULH4 789 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 MAP4K5Q9Y4K4 846 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 PTPRDP23468 1912 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 A0A1W2PRQ8 180 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 WNT10BO00744 389 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF749O43361 778 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PRKRAO75569 313 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ANXA4P09525 319 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 SFTPCP11686 197 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 AOAHP28039 575 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 SLC6A12P48065 614 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ART1P52961 327 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 DDX39BQ13838 428 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 MAPK14Q16539 360 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 NR4A3Q92570 626 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 IGSF8Q969P0 613 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 OR1F2PQ96R84 312 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 FAM117AQ9C073 453 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 DHCR7Q9UBM7 475 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PRAMEF4O60810 478 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ICOSLGO75144 302 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 C6orf47O95873 294 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ASGR2P07307 311 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF35P13682 527 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 ABOP16442 354 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 HSD3B2P26439 372 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 OR1E1P30953 314 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 HCCSP53701 268 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PPIAP62937 165 aaKnown RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PEA15Q15121 130 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 KLHL26Q53HC5 615 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PRAMEF9Q5VWM5 478 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PODNL1Q6PEZ8 512 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 SCD5Q86SK9 330 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 GPR32P1Q8NGA4 272 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 STOX2Q9P2F5 926 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-206ENST00000476391 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 CLEC4AQ9UMR7 237 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 PIKFYVEQ9Y2I7 2098 aa12.92□□□□□ -0.34
HDAC1-206ENST00000476391 A0A1B0GWJ7 208 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 RFPL4AA6NLU0 287 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 DRGXA6NNA5 263 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 COLCA2A8K830 154 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 RFPL4AL1F8VTS6 287 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 GABARAPH6UMI1 98 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms