RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 FAAP20Q6NZ36 180 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 UQCC2Q9BRT2 126 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 ZDHHC6Q9H6R6 413 aa12.85□□□□□ -0.35
NPHP4-207ENST00000470763 PCDHGA9Q9Y5G4 932 aaKnown RBP12.85□□□□□ -0.35
NPHP4-207ENST00000470763 NPC1O15118 1278 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 PTP4A3O75365 173 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 C4BPBP20851 252 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 CTSOP43234 321 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-207ENST00000470763 PRKAG1P54619 331 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
NPHP4-207ENST00000470763 RTN4RL1Q86UN2 441 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SLITRK4Q8IW52 837 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 C17orf47Q8NEP4 570 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 OR5W2Q8NH69 310 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 MARK1Q9P0L2 795 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SUSD5O60279 629 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 LDOC1O95751 146 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-207ENST00000470763 WDPCPO95876 746 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 ATF1P18846 271 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 CCR8P51685 355 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 HACD4Q5VWC8 232 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SMPDL3AQ92484 453 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SPATA5L1Q9BVQ7 753 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 TTTY10Q9BZA0 68 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-207ENST00000470763 NTMQ9P121 344 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 NTNG1Q9Y2I2 539 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 DYRK1BQ9Y463 629 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 USP34Q70CQ2 3546 aa12.84□□□□□ -0.35
NPHP4-207ENST00000470763 AIPO00170 330 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 REM1O75628 298 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 ADRB1P08588 477 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 PAICSP22234 425 aaKnown RBP12.83□□□□□ -0.35
NPHP4-207ENST00000470763 RAG2P55895 527 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 FGL2Q14314 439 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 PLBD1Q6P4A8 553 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 SEZ6L2Q6UXD5 910 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 MRGPREQ86SM8 312 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 PAQR7Q86WK9 346 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 OR2AP1Q8NGE2 309 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 SLC22A12Q96S37 553 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 PELOQ9BRX2 385 aaKnown RBP12.83□□□□□ -0.35
NPHP4-207ENST00000470763 ACTR6Q9GZN1 396 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 IFT22Q9H7X7 185 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 P2RX2Q9UBL9 471 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.35
NPHP4-207ENST00000470763 BACE2Q9Y5Z0 518 aa12.83□□□□□ -0.35
NPHP4-207ENST00000470763 FOXE1O00358 373 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 RP2O75695 350 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 RB1P06400 928 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 C1GALT1C1LP0DN25 315 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ALPPL2P10696 532 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 HTR1FP30939 366 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 RNF144AP50876 292 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 PSMA6P60900 246 aaKnown RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 TSPAN31Q12999 210 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 TAF12Q16514 161 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SLC22A10Q63ZE4 541 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 LINGO2Q7L985 606 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 MEIOBQ8N635 442 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ACBD7Q8N6N7 88 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 GNPDA2Q8TDQ7 276 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SLC5A11Q8WWX8 675 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 LYSMD1Q96S90 227 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 C12orf57Q99622 126 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 TIMP4Q99727 224 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 EVA1AQ9H8M9 152 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 NANSQ9NR45 359 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ICKQ9UPZ9 632 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ANXA7P20073 488 aaKnown RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SLC16A1P53985 500 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 PLD1Q13393 1074 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF783Q6ZMS7 281 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 Q6ZVL8 140 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 LRRC56Q8IYG6 542 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 OR5P2Q8WZ92 322 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 MRPS24Q96EL2 167 aaKnown RBP12.83□□□□□ -0.36
NPHP4-207ENST00000470763 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
NPHP4-207ENST00000470763 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
NPHP4-207ENST00000470763 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
NPHP4-207ENST00000470763 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
NPHP4-207ENST00000470763 PIP5K1CO60331 668 aa12.82□□□□□ -0.36
NPHP4-207ENST00000470763 DUSP11O75319 330 aaKnown RBP12.82□□□□□ -0.36
NPHP4-207ENST00000470763 RAB3BP20337 219 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms