RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RNF165Q6ZSG1 346 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 Q6ZSR9 355 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 SZRD1Q7Z422 152 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 GTF2IRD2Q86UP8 949 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 GATSQ8NAP1 163 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 IGFBPL1Q8WX77 278 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 RNF145Q96MT1 663 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 OR10A4Q9H209 315 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TLN2Q9Y4G6 2542 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TRIM64A6NGJ6 449 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TRIM64BA6NI03 449 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TNFSF11O14788 317 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 AZIN1O14977 448 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TMCC2O75069 709 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 OPN1LWP04000 364 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 ALOX5P09917 674 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 PAX1P15863 534 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 SDC1P18827 310 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 PDE7AQ13946 482 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 DUSP5Q16690 384 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 LIPMQ5VYY2 423 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 HBMQ6B0K9 141 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 MFSD12Q6NUT3 480 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 ZNF704Q6ZNC4 412 aaPredicted RBP20.37■□□□□ 0.85
USP42-205ENST00000465073 ZAR1Q86SH2 424 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 HOMEZQ8IX15 550 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 TSSK3Q96PN8 268 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 NPAS1Q99742 590 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 GPR52Q9Y2T5 361 aa20.37■□□□□ 0.85
USP42-205ENST00000465073 A0A0J9YW62 118 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 KIF2AO00139 706 aaPredicted RBP20.36■□□□□ 0.85
USP42-205ENST00000465073 SCDO00767 359 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 HSPA4LO95757 839 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 CHEK2O96017 543 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 TRABD2AQ86V40 505 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 OR2T11Q8NH01 316 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 FBXO30Q8TB52 745 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 TMEM171Q8WVE6 324 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 OSTF1Q92882 214 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 MTERF3Q96E29 417 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 TRMOQ9BU70 441 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 ACTR6Q9GZN1 396 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 BAIAP2L1Q9UHR4 511 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 TMED5Q9Y3A6 229 aa20.36■□□□□ 0.85
USP42-205ENST00000465073 CSPG4Q6UVK1 2322 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 HIVEP2P31629 2446 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 A0A1W2PQD3 144 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 TUBBP07437 444 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 DDX5P17844 614 aaKnown RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 EIF1P41567 113 aaKnown RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 ASMTP46597 345 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 CARD18P57730 90 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 RFTN2Q52LD8 501 aaPredicted RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 COX18Q8N8Q8 333 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 B4GALNT2Q8NHY0 566 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 KIF18AQ8NI77 898 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 C16orf58Q96GQ5 468 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 SH3YL1Q96HL8 342 aaPredicted RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 RHOXF2Q9BQY4 288 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 C12orf65Q9H3J6 166 aaKnown RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 TUBB1Q9H4B7 451 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 CXorf56Q9H5V9 222 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 TMEM185BQ9H7F4 350 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 PPCSQ9HAB8 311 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 ZNF701Q9NV72 531 aaPredicted RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 FBXO34Q9NWN3 711 aa20.35■□□□□ 0.85
USP42-205ENST00000465073 RAI1Q7Z5J4 1906 aaPredicted RBP20.35■□□□□ 0.85
USP42-205ENST00000465073 COPEO14579 308 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 CNOT4O95628 575 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 LINC00032P0C843 101 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 PABPC4LP0CB38 370 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 PSMB1P20618 241 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 PRIM2P49643 509 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 RPL38P63173 70 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 EXOSC6Q5RKV6 272 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 R3HCC1LQ7Z5L2 792 aaKnown RBP20.34■□□□□ 0.85
USP42-205ENST00000465073 TDRPQ86YL5 185 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 WFDC8Q8IUA0 241 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 C10orf107Q8IVU9 208 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 LILRA2Q8N149 483 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 CLHC1Q8NHS4 586 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 POC1BQ8TC44 478 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 PLPPR2Q96GM1 343 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 KLHL15Q96M94 604 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 TMEM204Q9BSN7 226 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 BTBD2Q9BX70 525 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 MID2Q9UJV3 735 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 FIS1Q9Y3D6 152 aa20.34■□□□□ 0.85
USP42-205ENST00000465073 ZANQ9Y493 2812 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 HS3ST1O14792 307 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 LSM1O15116 133 aaKnown RBP20.33■□□□□ 0.85
USP42-205ENST00000465073 SHBGP04278 402 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 AGTR1P30556 359 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 POU6F2P78424 691 aaPredicted RBP20.33■□□□□ 0.85
USP42-205ENST00000465073 MLC1Q15049 377 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 ZNF611Q8N823 705 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 JADE3Q92613 823 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 REXO5Q96IC2 774 aaKnown RBP20.33■□□□□ 0.85
USP42-205ENST00000465073 HDHD5Q9BXW7 423 aa20.33■□□□□ 0.85
USP42-205ENST00000465073 TIGARQ9NQ88 270 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms