RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MRPL46Q9H2W6 279 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C12orf65Q9H3J6 166 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 DSN1Q9H410 356 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 PLEKHF2Q9H8W4 249 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 BRF2Q9HAW0 419 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FOLH1BQ9HBA9 442 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC35C2Q9NQQ7 365 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 GALNT8Q9NY28 637 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TAS2R10Q9NYW0 307 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ZIM2Q9NZV7 527 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 JKAMPQ9P055 326 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MED11Q9P086 117 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 C6orf203Q9P0P8 240 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 PRODH2Q9UF12 536 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 FETUBQ9UGM5 382 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TBK1Q9UHD2 729 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF180Q9UJW8 692 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 PSME2Q9UL46 239 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 TMCO1Q9UM00 188 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 NFU1Q9UMS0 254 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 CFL2Q9Y281 166 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 WIF1Q9Y5W5 379 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 OTOGQ6ZRI0 2925 aa4.24□□□□□ -1.73
GTF3C3-208ENST00000455546 MTORP42345 2549 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 A0A087WUV0 522 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 EXOC1LA0A1B0GW35 172 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 OR6C70A6NIJ9 312 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 A8MXE2 369 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CASKO14936 926 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TO15178 435 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ACOX3O15254 700 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SCO2O43819 266 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PCDH7O60245 1069 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TNFSF13O75888 250 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 IL18BPO95998 194 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 KRT6AP02538 564 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 HRGP04196 525 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 KRT6BP04259 564 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 JUNP05412 331 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ANXA4P09525 319 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 RHOXF2BP0C7M4 288 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 JUNBP17275 347 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 DPP4P27487 766 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 IL12BP29460 328 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SRD5A2P31213 254 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 MPIP34949 423 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CPA2P48052 419 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 KRT6CP48668 564 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 LHX2P50458 406 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 NCBP2P52298 156 aaKnown RBP eCLIP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PRKAA2P54646 552 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GAS1P54826 345 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CLDN15P56746 228 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CLDN18P56856 261 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 B3GALT5-AS1P59052 145 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 DCAF7P61962 342 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TRA2BP62995 288 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PSG6Q00889 435 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ACSM2AQ08AH3 577 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 STX5Q13190 355 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SNTA1Q13424 505 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GAB1Q13480 694 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PIN1Q13526 163 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 KEAP1Q14145 624 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC29A2Q14542 456 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ODF1Q14990 250 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 RASA2Q15283 850 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SF3B4Q15427 424 aaKnown RBP eCLIP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 WHAMMP3Q1A5X7 153 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 DEFB113Q30KQ7 82 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ACSM2BQ68CK6 577 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ANKRD26P1Q6NSI1 321 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TMEM81Q6P7N7 255 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 VWA1Q6PCB0 445 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ENPP6Q6UWR7 440 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TMEM107Q6UX40 140 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TIFABQ6ZNK6 161 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GPRIN3Q6ZVF9 776 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ESPNLQ6ZVH7 1005 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 P4HA3Q7Z4N8 544 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ADGRE4PQ86SQ3 457 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GALNT10Q86SR1 603 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 MARCH3Q86UD3 253 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 EXOC3L1Q86VI1 746 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GRAMD2AQ8IUY3 354 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CCNYL1Q8N7R7 359 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CNEP1R1Q8N9A8 125 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CHDHQ8NE62 594 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF675Q8TD23 568 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 MZB1Q8WU39 189 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 FIG4Q92562 907 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 GFM2Q969S9 779 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 STARD4Q96DR4 205 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 MTBPQ96DY7 904 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PGM2Q96G03 612 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF845Q96IR2 970 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms