RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PRKRAO75569 313 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 KRT34O76011 436 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR5F1O95221 314 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 PIGNO95427 931 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 THRBP10828 461 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 IRF2P14316 349 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 NELFEP18615 380 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ADRA2CP18825 462 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TPSB2P20231 275 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CD9P21926 228 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TLX1P31314 330 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RFC4P35249 363 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 DCTP40126 519 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC26A3P40879 764 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CRKLP46109 303 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CASP4P49662 377 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CLK1P49759 484 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPL14P50914 215 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ATP4BP51164 291 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 NDST1P52848 882 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RAB14P61106 215 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 YWHAEP62258 255 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 DLK1P80370 383 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CNTN2Q02246 1040 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 GABPAQ06546 454 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CD300CQ08708 224 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ARL16Q0P5N6 197 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CEACAM7Q14002 265 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 VEZF1Q14119 521 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 KCNJ11Q14654 390 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TPSAB1Q15661 275 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ITPRIPL2Q3MIP1 535 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF718Q3SXZ3 478 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 UGT3A2Q3SY77 523 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 YIF1BQ5BJH7 314 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TECRLQ5HYJ1 363 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 COQ5Q5HYK3 327 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 MPP7Q5T2T1 576 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 UBE2UQ5VVX9 321 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 REP15Q6BDI9 236 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 C11orf88Q6PI97 169 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZCCHC23Q6ZST2 131 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 LUZP2Q86TE4 346 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 PHF13Q86YI8 300 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 BBS7Q8IWZ6 715 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 MICU2Q8IYU8 434 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TCTE3Q8IZS6 198 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 CLEC4FQ8N1N0 589 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 SVOPLQ8N434 492 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RYBPQ8N488 228 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 NIPA2Q8N8Q9 360 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 BMPERQ8N8U9 685 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TTLQ8NG68 377 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR6F1Q8NGZ6 308 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 VANGL1Q8TAA9 524 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZFAND1Q8TCF1 268 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ANKRD49Q8WVL7 239 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 AP2M1Q96CW1 435 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 GIMAP5Q96F15 307 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMEM80Q96HE8 168 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM20AQ96MK3 541 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPRD1AQ96P16 312 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 QKIQ96PU8 341 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 NODALQ96S42 347 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 SORT1Q99523 831 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 RAD9AQ99638 391 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 C17orf62Q9BQA9 187 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 C11orf70Q9BRQ4 267 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FUNDC2Q9BWH2 189 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 GTPBP2Q9BX10 602 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 IDI2Q9BXS1 227 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 DGCR6LQ9BY27 220 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FGFBP2Q9BYJ0 223 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 C6orf62Q9GZU0 229 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM49AQ9H0Q0 323 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMEM245Q9H330 911 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 LRRC40Q9H9A6 602 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 COG4Q9H9E3 785 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 POPDC2Q9HBU9 364 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 EML4Q9HC35 981 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 MRM3Q9HC36 420 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 A4GALTQ9NPC4 353 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ACP6Q9NPH0 428 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 XPNPEP1Q9NQW7 623 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 DYRK4Q9NR20 520 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 ACOXLQ9NUZ1 547 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 DUS2Q9NX74 493 aaKnown RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 PAQR5Q9NXK6 330 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 SCN3BQ9NY72 215 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TAS2R9Q9NYW1 312 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 KLHL21Q9UJP4 597 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 C3orf18Q9UK00 162 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 FBXO5Q9UKT4 447 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 BAIAP2Q9UQB8 552 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 PRELID3BQ9Y3B1 194 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 TPRKBQ9Y3C4 175 aa4.01□□□□□ -1.77
HMGB1P16-201ENST00000447155 A0A0G2JMZ2 1700 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms