RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 DEC1Q9P2X7 70 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 FBXL3Q9UKT7 428 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 PAPPA2Q9BXP8 1791 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 ZNF236Q9UL36 1845 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 TRBV2A0A0J9YWF9 115 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 IGLON5A6NGN9 336 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CA12O43570 354 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CDC123O75794 336 aaPredicted RBP9.91□□□□□ -0.82
RNF43-207ENST00000583753 RGS11O94810 467 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 SPDEFO95238 335 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 PRNPP04156 253 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CHRM4P08173 479 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 LIPCP11150 499 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CXCL3P19876 107 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.91□□□□□ -0.826e-6■■■■□ 22.6
RNF43-207ENST00000583753 ARTNQ5T4W7 220 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 OTPQ5XKR4 325 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 RANBP3LQ86VV4 465 aaPredicted RBP9.91□□□□□ -0.82
RNF43-207ENST00000583753 OR52E2Q8NGJ4 325 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CDS1Q92903 461 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 NXPE2Q96DL1 559 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 NEURL3Q96EH8 262 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 CCDC3Q9BQI4 270 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 OR52D1Q9H346 318 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 TMEM27Q9HBJ8 222 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 BABAM2Q9NXR7 383 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 KLHL21Q9UJP4 597 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 A0A0B4J293 547 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 ANTXRLA6NF34 631 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 ACOD1A6NK06 481 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 LGALS8O00214 317 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 LIMS3P0CW19 117 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 LIMS4P0CW20 117 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 STAT5AP42229 794 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 MAGEB1P43366 347 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 PRLHRP49683 370 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 VEGFCP49767 419 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 MVDP53602 400 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 ZNF155Q12901 538 aaPredicted RBP9.91□□□□□ -0.82
RNF43-207ENST00000583753 SLC25A35Q3KQZ1 300 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 MINDY4Q4G0A6 757 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 C3orf38Q5JPI3 329 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 FAM83HQ6ZRV2 1179 aaPredicted RBP9.91□□□□□ -0.82
RNF43-207ENST00000583753 OAFQ86UD1 273 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 KIF18BQ86Y91 864 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
RNF43-207ENST00000583753 SDR9C7Q8NEX9 313 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D20Q96BZ9 403 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 SLITRK2Q9H156 845 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 REV1Q9UBZ9 1251 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 TRAPPC4Q9Y296 219 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 OR10H1Q9Y4A9 318 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 PCDHGB7Q9Y5F8 929 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 BRCA2P51587 3418 aa9.91□□□□□ -0.82
RNF43-207ENST00000583753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 RNF13O43567 381 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SLC43A1O75387 559 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 BMP8BP34820 402 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 CFAP77Q6ZQR2 320 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 BMP8AQ7Z5Y6 402 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 FAM26EQ8N5C1 309 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 OR13C2Q8NGS9 318 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 MOSPD2Q8NHP6 518 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 LCN9Q8WX39 176 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 ATF6BQ99941 703 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 MICU1Q9BPX6 476 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 LMAN2LQ9H0V9 348 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 CHST8Q9H2A9 424 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SAV1Q9H4B6 383 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 NIPAL2Q9H841 368 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 GPR55Q9Y2T6 319 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 ATG4BQ9Y4P1 393 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 DOCK6Q96HP0 2047 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3DA0A087WVF3 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3IA0A087WXS9 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3EA0A087X179 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3KA0A087X1G2 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3FA6NER0 549 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 UNC119BA6NIH7 251 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3LB9A6J9 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 BLOC1S5-TXNDC5H3BN57 136 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3HP0C7X1 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SYN1P17600 705 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TLX1P31314 330 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 GBX2P52951 348 aaPredicted RBP9.9□□□□□ -0.82
RNF43-207ENST00000583753 SEC13P55735 322 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 PGGHGQ32M88 737 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 BEX5Q5H9J7 111 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3GQ6DHY5 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 ELP2Q6IA86 826 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3CQ6IPX1 549 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SFXN4Q6P4A7 337 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 QSOX2Q6ZRP7 698 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 CREB3L2Q70SY1 520 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 GPR155Q7Z3F1 870 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 UBE2Q1Q7Z7E8 422 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 SLITRK4Q8IW52 837 aa9.9□□□□□ -0.82
RNF43-207ENST00000583753 TBC1D3Q8IZP1 549 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms