RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 TMEM114B3SHH9 223 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 ALG1L2C9J202 215 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 EMC8O43402 210 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 GMFGO60234 142 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 SPAG7O75391 227 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.229e-6■■■■□ 24.8
KLHDC4-208ENST00000562261 KCNK2O95069 426 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 OXSR1O95747 527 aaPredicted RBP13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 NGFRP08138 427 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 DDX5P17844 614 aaKnown RBP13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 HPCAL1P37235 193 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 CLDN20P56880 219 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF844Q08AG5 666 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 IFFO1Q0D2I5 559 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 MLC1Q15049 377 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 TMEM44Q2T9K0 475 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 XKR7Q5GH72 579 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 MFSD12Q6NUT3 480 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 ZCCHC23Q6ZST2 131 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 SLC16A11Q8NCK7 471 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 OR4C3Q8NH37 302 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 FAM110BQ8TC76 370 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 AGR3Q8TD06 166 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 TCP10LQ8TDR4 215 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 SMPDL3BQ92485 455 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 PPP3R2Q96LZ3 170 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 PLEKHF2Q9H8W4 249 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 HHATLQ9HCP6 504 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 GIMAP2Q9UG22 337 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 AP4B1Q9Y6B7 739 aa13.68□□□□□ -0.22
KLHDC4-208ENST00000562261 SCAMP2O15127 329 aaKnown RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 NDUFB5O43674 189 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 RAF1P04049 648 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 HRGP04196 525 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ALOX5P09917 674 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 CD99P14209 185 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 EFNA1P20827 205 aaPredicted RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 TBXA2RP21731 343 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 MAPK1P28482 360 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 SERPINB5P36952 375 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 KIR2DL2P43627 348 aaPredicted RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 RPS3AP61247 264 aaKnown RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 OCRLQ01968 901 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 FAM27E3Q08E93 113 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 PON3Q15166 354 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 DUSP5Q16690 384 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 EXOSC6Q5RKV6 272 aaKnown RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ZCCHC12Q6PEW1 402 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 CAMKMTQ7Z624 323 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 TGIF2LYQ8IUE0 185 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 METTL25Q8N6Q8 603 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 COX18Q8N8Q8 333 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 OR6Y1Q8NGX8 325 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 FNDC9Q8TBE3 224 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 JADE3Q92613 823 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 FAM120BQ96EK7 910 aaKnown RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF845Q96IR2 970 aaPredicted RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ALPK1Q96QP1 1244 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 RNF122Q9H9V4 155 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 NDRG3Q9UGV2 375 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ATP6V1HQ9UI12 483 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 VDAC3Q9Y277 283 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF175Q9Y473 711 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 TESMINQ9Y4I5 508 aa13.67□□□□□ -0.22
KLHDC4-208ENST00000562261 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 PEX11AO75192 247 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ATE1O95260 518 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF17P17021 662 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 LCN1P31025 176 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ARRB2P32121 409 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 RPL3P39023 403 aaKnown RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 PCYT1AP49585 367 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 PRIM2P49643 509 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 SIRPAP78324 504 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 KEAP1Q14145 624 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 POU4F3Q15319 338 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ATP6AP1LQ52LC2 224 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF474Q6S9Z5 364 aaPredicted RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 BTLAQ7Z6A9 289 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 GGNQ86UU5 652 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 OR7A2PQ8NGA2 310 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 OTUB1Q96FW1 271 aaPredicted RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 C16orf58Q96GQ5 468 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 C3orf30Q96M34 536 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 OPN3Q9H1Y3 402 aaPredicted RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ZCCHC3Q9NUD5 404 aaKnown RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 FBXO34Q9NWN3 711 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ACTL7BQ9Y614 415 aa13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
KLHDC4-208ENST00000562261 A0A087WZY1 265 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms