RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 BRINP1O60477 761 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 RAB36O95755 333 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 OCM2P0CE71 109 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 OCMP0CE72 109 aaPredicted RBP15.15■□□□□ 0.02
COL4A1-204ENST00000543140 MAP3K8P41279 467 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 C19orf48Q6RUI8 117 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 SLC36A4Q6YBV0 504 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 HSDL2Q6YN16 418 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 PFN4Q8NHR9 129 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 OSTF1Q92882 214 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 RIT1Q92963 219 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 COX4I2Q96KJ9 171 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 CNPPD1Q9BV87 410 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 DPH1Q9BZG8 443 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 B3GNT3Q9Y2A9 372 aa15.15■□□□□ 0.02
COL4A1-204ENST00000543140 ASXL3Q9C0F0 2248 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 A0A1W2PR77 199 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 TRAPPC13A5PLN9 417 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 KCNK2O95069 426 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 SLC2A10O95528 541 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 RNH1P13489 461 aaKnown RBP15.14■□□□□ 0.01
COL4A1-204ENST00000543140 FASLGP48023 281 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 RPL6Q02878 288 aaKnown RBP15.14■□□□□ 0.01
COL4A1-204ENST00000543140 NNATQ16517 81 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 FLYWCH1Q4VC44 716 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 OR2G6Q5TZ20 316 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 LIPKQ5VXJ0 399 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 NKAIN2Q5VXU1 208 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 ZCCHC12Q6PEW1 402 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 LINC00299Q6ZSB3 139 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 GKN2Q86XP6 184 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 POGLUT1Q8NBL1 392 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 OTULINQ96BN8 352 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 SAMD8Q96LT4 415 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 MMP27Q9H306 513 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 RERGLQ9H628 205 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 ATP13A2Q9NQ11 1180 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 C20orf141Q9NUB4 165 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 FAIMQ9NVQ4 179 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 SOHLH2Q9NX45 425 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 IL20Q9NYY1 176 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 NLGN3Q9NZ94 848 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 DIMT1Q9UNQ2 313 aaKnown RBP15.14■□□□□ 0.01
COL4A1-204ENST00000543140 SEC16AO15027 2179 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 PRODHO43272 600 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 KLF4O43474 513 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 MAOAP21397 527 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 S1PR1P21453 382 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 STAT5AP42229 794 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 MTNR1AP48039 350 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 PSG6Q00889 435 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 PLAURQ03405 335 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 DBPQ10586 325 aaPredicted RBP15.14■□□□□ 0.01
COL4A1-204ENST00000543140 PDZK1Q5T2W1 519 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 ZNF620Q6ZNG0 422 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 MRGPREQ86SM8 312 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 PROKR2Q8NFJ6 384 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 CHPT1Q8WUD6 406 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 TCTN2Q96GX1 697 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 DTX4Q9Y2E6 619 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 CSNK1G3Q9Y6M4 447 aa15.14■□□□□ 0.01
COL4A1-204ENST00000543140 IGHV5-51A0A0C4DH38 117 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 GAS1P54826 345 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 C1DQ13901 141 aaKnown RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 ZNF267Q14586 743 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 TIMM50Q3ZCQ8 353 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 GRHL3Q8TE85 626 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 CNOT9Q92600 299 aaKnown RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 MMABQ96EY8 250 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 DACH2Q96NX9 599 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 DAPK2Q9UIK4 370 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 HYKKA2RU49 373 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 SURF4O15260 269 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 SRPX2O60687 465 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 MYL12AP19105 171 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 EMDP50402 254 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 PGDP52209 483 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 KLHL22Q53GT1 634 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 BBS1Q8NFJ9 593 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 TMEM203Q969S6 136 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 TRMT61AQ96FX7 289 aaKnown RBP15.13■□□□□ 0.01
COL4A1-204ENST00000543140 HSPA12BQ96MM6 686 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 FOLH1BQ9HBA9 442 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 UCKL1Q9NWZ5 548 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 CABIN1Q9Y6J0 2220 aa15.13■□□□□ 0.01
COL4A1-204ENST00000543140 CEP192Q8TEP8 1941 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 FAM183AA6NL82 134 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 NKX2-2O95096 273 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 IGKV1D-16P01601 117 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 IFI30P13284 250 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 MAKP20794 623 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 KCNAB1Q14722 419 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 TMEM239Q8WW34 195 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 GATAD2BQ8WXI9 593 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 ENKD1Q9H0I2 346 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 PRTFDC1Q9NRG1 225 aa15.12■□□□□ 0.01
COL4A1-204ENST00000543140 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
COL4A1-204ENST00000543140 UNC13CQ8NB66 2214 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms