RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ERMNQ8TAM6 284 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 UBA3Q8TBC4 463 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 PIK3R3Q92569 461 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 RND1Q92730 232 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 GTF2H4Q92759 462 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 SMARCD2Q92925 531 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 SLC47A1Q96FL8 570 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 RBM4Q9BWF3 364 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 CHID1Q9BWS9 393 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 COMMD4Q9H0A8 199 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 CPVLQ9H3G5 476 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 NMRAL1Q9HBL8 299 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 MRPL47Q9HD33 250 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 MLXIPLQ9NP71 852 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 UBE2TQ9NPD8 197 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 THSD1Q9NS62 852 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 TMEM45AQ9NWC5 275 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 GPATCH2LQ9NWQ4 482 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 EURLQ9NYK6 297 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 PTTG3PQ9NZH4 202 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 RCOR3Q9P2K3 495 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 ABCD2Q9UBJ2 740 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 SLC7A7Q9UM01 511 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 TCAF1Q9Y4C2 921 aa4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 PUS1Q9Y606 427 aaKnown RBP eCLIP4.58□□□□□ -1.68
R3HDM1-216ENST00000483065 LRPPRCP42704 1394 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 NPIPA5A0A0B4J1W7 369 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 A0A1B0GTL3 188 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 NKX6-3A6NJ46 265 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 E7ESA3 106 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 NPIPA5E9PKD4 350 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 SIRPB1O00241 398 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TRAFD1O14545 582 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 NDUFAB1O14561 156 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 DYNC1I1O14576 645 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TOR1AO14656 332 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 EPHB6O15197 1021 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TAPBPO15533 448 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 PRKRAO75569 313 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 FGF19O95750 216 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RPN2P04844 631 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TFAP2AP05549 437 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ADRB1P08588 477 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ALOX5P09917 674 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 FAM106CPP0CH98 169 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 PNMA6AP0CW24 399 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HKR1P10072 659 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 BCKDHAP12694 445 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 GNLYP22749 145 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 LHCGRP22888 699 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 GLRA1P23415 457 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RPL4P36578 427 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RASSF2P50749 326 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 PGGT1BP53609 377 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 CTSWP56202 376 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ZP1P60852 638 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 DSTNP60981 165 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HERV-K104P61576 105 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 B2MP61769 119 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RPS4XP62701 263 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TAF10Q12962 218 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 PIGHQ14442 188 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 DUSP6Q16828 381 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF699Q32M78 642 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 MS4A18Q3C1V0 323 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 SLC22A6Q4U2R8 563 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 THEM4Q5T1C6 240 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ZNF772Q68DY9 489 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 OR52W1Q6IF63 320 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TYW3Q6IPR3 259 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ADAM5Q6NVV9 412 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TMIGD1Q6UXZ0 262 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HSDL2Q6YN16 418 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HDDC2Q7Z4H3 204 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 APRG1Q8IVJ8 170 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 MAB21L3Q8N8X9 362 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 OR52N5Q8NH56 324 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 C8orf46Q8TAG6 207 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 FANK1Q8TC84 345 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 MAGEE2Q8TD90 523 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TMEM239Q8WW34 195 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HTR3CQ8WXA8 447 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ASB10Q8WXI3 467 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 SORCS1Q8WY21 1168 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 HAS1Q92839 578 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TADA1Q96BN2 335 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 CXorf40BQ96DE9 158 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 NSL1Q96IY1 281 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 TXNDC15Q96J42 360 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 XPO6Q96QU8 1125 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ERGIC2Q96RQ1 377 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 CLCC1Q96S66 551 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 CTRCQ99895 268 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RAB34Q9BZG1 259 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 SEMA4CQ9C0C4 833 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 SLC25A51Q9H1U9 297 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 DUS2Q9NX74 493 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 ING1Q9UK53 422 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 FZD1Q9UP38 647 aa4.57□□□□□ -1.68
R3HDM1-216ENST00000483065 RNF115Q9Y4L5 304 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms