RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PPM1NQ8N819 430 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 PTGR2Q8N8N7 351 aaPredicted RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 ELOA3Q8NG57 546 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 OR7G2Q8NG99 324 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 SGMS2Q8NHU3 365 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 PIWIL2Q8TC59 973 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 DUSP19Q8WTR2 217 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 ROBO4Q8WZ75 1007 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 HSD17B8Q92506 261 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 ATP6V1E2Q96A05 226 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 EXOSC8Q96B26 276 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 MTBPQ96DY7 904 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 GPR78Q96P69 363 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 CITED4Q96RK1 184 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 HBEGFQ99075 208 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 NPAS1Q99742 590 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 RHNO1Q9BSD3 238 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 FAIM2Q9BWQ8 316 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 HDHD5Q9BXW7 423 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 PRRG4Q9BZD6 226 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 ELOVL6Q9H5J4 265 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 BRF2Q9HAW0 419 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 NGBQ9NPG2 151 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 PFDN4Q9NQP4 134 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 SDHAF3Q9NRP4 125 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 GLRX2Q9NS18 164 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM120CQ9NX05 1096 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 TAS2R9Q9NYW1 312 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 CPSF2Q9P2I0 782 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 XPR1Q9UBH6 696 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 PCTPQ9UKL6 214 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 MCTS1Q9ULC4 181 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 OR10H1Q9Y4A9 318 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 SNX8Q9Y5X2 465 aa4.56□□□□□ -1.68
SNRNP40-204ENST00000474025 YLPM1P49750 1951 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A087WV62 115 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A087WZY1 265 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 A0A0J9YW62 118 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 HMX2A2RU54 273 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 C7orf72A4D263 438 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 A6NJY4 79 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SHISA9B4DS77 424 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 UBFD1O14562 309 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 STX16O14662 325 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TNFSF11O14788 317 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 NDUFB5O43674 189 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 CXCL13O43927 109 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 GMFGO60234 142 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 COQ9O75208 318 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 KLHL2O95198 593 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PSMG1O95456 288 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SYNGR4O95473 234 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 NTN1O95631 604 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IL33O95760 270 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ANGPTL1O95841 491 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PDYNP01213 254 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 OPN1LWP04000 364 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IL3P08700 152 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 GSTA2P09210 222 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IGHV4-31P0DP07 118 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TCP1P17987 556 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SRD5A1P18405 259 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IL32P24001 234 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IGFBP5P24593 272 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PSMA4P25789 261 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 C21orf58P58505 322 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 DSCR9P59020 149 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 RAC1P63000 192 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 RAE1P78406 368 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 IRX1P78414 480 aaPredicted RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 PRR5P85299 388 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TNP2Q05952 138 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 C17orf67Q0P5P2 114 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF239Q16600 458 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 NRF1Q16656 503 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 DECR1Q16698 335 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SH2D4BQ5SQS7 431 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 SFRP5Q5T4F7 317 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 MROH9Q5TGP6 573 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 HBMQ6B0K9 141 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TTC19Q6DKK2 380 aaPredicted RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 C11orf71Q6IPW1 123 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 KLC3Q6P597 504 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 CLEC2AQ6UVW9 174 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ESPNLQ6ZVH7 1005 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 RPS27LQ71UM5 84 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 NUFIP2Q7Z417 695 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 EXOC3L1Q86VI1 746 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 TDRPQ86YL5 185 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 CREG2Q8IUH2 290 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 WDR75Q8IWA0 830 aaKnown RBP4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF525Q8N782 197 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 ARIH2OSQ8N7S6 290 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 BANPQ8N9N5 519 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 OR4F6Q8NGB9 312 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 OR2V1Q8NHB1 315 aa4.55□□□□□ -1.68
SNRNP40-204ENST00000474025 RNF128Q8TEB7 428 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms