RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 IKZF1Q13422 519 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ERV3-1Q14264 604 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF267Q14586 743 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 EXOSC7Q15024 291 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NSDHLQ15738 373 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DUSP5Q16690 384 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DECR1Q16698 335 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DUSP7Q16829 419 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SYT16Q17RD7 645 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MINDY4Q4G0A6 757 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 IQCCQ4KMZ1 466 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NKAIN1Q4KMZ8 207 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ANKRD39Q53RE8 183 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 COLEC12Q5KU26 742 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DCST2Q5T1A1 773 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OTUD3Q5T2D3 398 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 C6orf52Q5T4I8 152 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MFSD4BQ5TF39 518 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MLIPQ5VWP3 458 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 KRT80Q6KB66 452 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 FAHD1Q6P587 224 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DHRS4L2Q6PKH6 230 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 RBM44Q6ZP01 1051 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OVCH1Q7RTY7 1134 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMPRSS9Q7Z410 1059 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 GALNT10Q86SR1 603 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CARM1Q86X55 608 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 EPHX4Q8IUS5 362 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 APLFQ8IW19 511 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NAXDQ8IW45 347 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CMIPQ8IY22 773 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TAGAPQ8N103 731 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF619Q8N2I2 560 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 METTL27Q8N6F8 245 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ATG16L2Q8NAA4 619 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SMYD1Q8NB12 490 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR52R1Q8NGF1 315 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR2I1PQ8NGU4 316 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR52P1PQ8NH57 321 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 GIPC3Q8TF64 312 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PHF10Q8WUB8 498 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 APOBEC4Q8WW27 367 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CYGBQ8WWM9 190 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 METTL21AQ8WXB1 218 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC35B4Q969S0 331 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 VSTM2LQ96N03 204 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 LRFN5Q96NI6 719 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SDF2Q99470 211 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PSD2Q9BQI7 771 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ADI1Q9BV57 179 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 FNDC11Q9BVV2 318 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 YTHDF1Q9BYJ9 559 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ANKRD60Q9BZ19 345 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF350Q9GZX5 532 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 HOXD1Q9GZZ0 328 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR10A5Q9H207 317 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC38A1Q9H2H9 487 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ANKRD19PQ9H560 264 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 WDR54Q9H977 334 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF556Q9HAH1 456 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 FOLH1BQ9HBA9 442 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 GP6Q9HCN6 339 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 Q9N2J8 555 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ADAP2Q9NPF8 381 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NECTIN3Q9NQS3 549 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PNO1Q9NRX1 252 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ACER3Q9NUN7 267 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SIDT1Q9NXL6 827 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PDP1Q9P0J1 537 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 KIF17Q9P2E2 1029 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DHCR7Q9UBM7 475 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 COPS7AQ9UBW8 275 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PFDN2Q9UHV9 154 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 KCND3Q9UK17 655 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NXT1Q9UKK6 140 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ABCG2Q9UNQ0 655 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 GPR55Q9Y2T6 319 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 WDR45Q9Y484 360 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CLDN16Q9Y5I7 305 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 HEMK1Q9Y5R4 338 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 KCNE3Q9Y6H6 103 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MAU2Q9Y6X3 613 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 R4GN57 208 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OTOGLQ3ZCN5 2332 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 EP300Q09472 2414 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZFHX2Q9C0A1 2572 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 KIF26BQ2KJY2 2108 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 A0A1W2PRQ8 180 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 CDHR4A6H8M9 788 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 VSTM2BA6NLU5 285 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 EFCAB7A8K855 629 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 C9J4A7 227 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 FAAHO00519 579 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 AP3D1O14617 1153 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC16A6O15403 523 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 TBX1O43435 398 aa3.67□□□□□ -1.82
HMGB1P37-201ENST00000439613 KIAA0513O60268 411 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms