RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ZNF195O14628 629 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 NDUFB5O43674 189 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 ZNF708P17019 499 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 IGFBP2P18065 325 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 HK1P19367 917 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 TCEA1P23193 301 aaKnown RBP18.4■□□□□ 0.54
GTF3A-202ENST00000419181 STARP49675 285 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 CLDN18P56856 261 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 RCAN2Q14206 197 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 HSPB2Q16082 182 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 FAM174BQ3ZCQ3 159 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 DCST2Q5T1A1 773 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 ANXA8L1Q5VT79 327 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 ANKRD46Q86W74 232 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 MCEMP1Q8IX19 187 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 VPS37AQ8NEZ2 397 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 OR4A15Q8NGL6 344 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 TRIB1Q96RU8 372 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 SPOCK3Q9BQ16 436 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 TUBA1CQ9BQE3 449 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 SERHL2Q9H4I8 314 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 CALHM2Q9HA72 323 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 HHATLQ9HCP6 504 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 PCDHGB4Q9UN71 923 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 DCHS2Q6V1P9 2916 aa18.4■□□□□ 0.54
GTF3A-202ENST00000419181 FBN2P35556 2912 aa18.39■□□□□ 0.54
GTF3A-202ENST00000419181 LRBAP50851 2863 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 RNF103-CHMP3A0A140T963 221 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 MBD3L4A6NDZ8 208 aaPredicted RBP18.39■□□□□ 0.53
GTF3A-202ENST00000419181 MBD3L3A6NE82 208 aaPredicted RBP18.39■□□□□ 0.53
GTF3A-202ENST00000419181 MBD3L5A6NJ08 208 aaPredicted RBP18.39■□□□□ 0.53
GTF3A-202ENST00000419181 H0Y3Z8 333 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 MSX1P28360 303 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 NME5P56597 212 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 UFM1P61960 85 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 RPS26P62854 115 aaKnown RBP18.39■□□□□ 0.53
GTF3A-202ENST00000419181 SRYQ05066 204 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 SLC25A35Q3KQZ1 300 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 SLC9B1Q4ZJI4 515 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 C6orf120Q7Z4R8 191 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 ADGRE4PQ86SQ3 457 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 CLEC4FQ8N1N0 589 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 OR5D16Q8NGK9 328 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 MBD3L2Q8NHZ7 208 aaPredicted RBP18.39■□□□□ 0.53
GTF3A-202ENST00000419181 ACTRT2Q8TDY3 377 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 OR7D2Q96RA2 312 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 TRIM8Q9BZR9 551 aa18.39■□□□□ 0.53
GTF3A-202ENST00000419181 A0A1W2PQD3 144 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 HPGDP15428 266 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 ATP6V1C1P21283 382 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 IL12AP29459 219 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 BCL2A1Q16548 175 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 GLYR1Q49A26 553 aaPredicted RBP18.38■□□□□ 0.53
GTF3A-202ENST00000419181 RAET1LQ5VY80 246 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 MISPQ8IVT2 679 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 GATSQ8NAP1 163 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 C7orf26Q96N11 449 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 UCN2Q96RP3 112 aa18.38■□□□□ 0.53
GTF3A-202ENST00000419181 C9JVG2 144 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 SCDO00767 359 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 IL2RAP01589 272 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 IDO1P14902 403 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 MATN1P21941 496 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 UQCRC2P22695 453 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 S100A3P33764 101 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF136P52737 540 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 CD226Q15762 336 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 NXNQ6DKJ4 435 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 POMZP3Q6PJE2 187 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 ARSKQ6UWY0 536 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 MEX3BQ6ZN04 569 aaKnown RBP18.37■□□□□ 0.53
GTF3A-202ENST00000419181 GOT1L1Q8NHS2 421 aaPredicted RBP18.37■□□□□ 0.53
GTF3A-202ENST00000419181 MIPOL1Q8TD10 442 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 SLC35G5Q96KT7 338 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 CCDC115Q96NT0 180 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 PIGQQ9BRB3 760 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 BTNL2Q9UIR0 455 aa18.37■□□□□ 0.53
GTF3A-202ENST00000419181 OR2M5A3KFT3 312 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 DUXAA6NLW8 204 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 CLCA1A8K7I4 914 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 HMGB1P1B2RPK0 211 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 NPIPB9F8W1W9 429 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 LINC01387J3KSC0 135 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 GMFGO60234 142 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 CPSF4O95639 269 aaKnown RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 PGRP06401 933 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 PEPDP12955 493 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 DGKQP52824 942 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 TMEM44Q2T9K0 475 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 PDCD4Q53EL6 469 aaKnown RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 KLHL26Q53HC5 615 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 SAXO2Q658L1 398 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 GDF7Q7Z4P5 450 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF295-AS1Q8N0V1 137 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 GOLGA6L1Q8N7Z2 621 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 C9orf106Q8NAJ2 232 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 RELL2Q8NC24 303 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 GLB1L3Q8NCI6 653 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 CHDHQ8NE62 594 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms