RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 KIF20AO95235 890 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 CCDC183Q5T5S1 534 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 CWC25Q9NXE8 425 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 OTUD6BQ8N6M0 293 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 YEATS4O95619 227 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 RAB3IL1Q8TBN0 382 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 SLC26A6Q9BXS9 759 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 GBP3Q9H0R5 595 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 TTF1Q15361 905 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
CACNA1A-221ENST00000636012 MCM3P25205 808 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 NBPF4Q96M43 638 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 TSPY3P0CV98 308 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 TSPY8P0CW00 308 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 FAM212AQ96EL1 285 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 FSD2A1L4K1 749 aa18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 PAIP2Q9BPZ3 127 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-221ENST00000636012 KIF18AQ8NI77 898 aa18.33■□□□□ 0.52
CACNA1A-221ENST00000636012 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.52
CACNA1A-221ENST00000636012 PPP1R14CQ8TAE6 165 aa18.33■□□□□ 0.52
CACNA1A-221ENST00000636012 PHACTR2O75167 634 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 PICALMQ13492 652 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 DNAAF4Q8WXU2 420 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 STX6O43752 255 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 UBA7P41226 1012 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 NME9Q86XW9 330 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 TFIP11Q9UBB9 837 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 IKBKGQ9Y6K9 419 aa18.32■□□□□ 0.52
CACNA1A-221ENST00000636012 POLR3GO15318 223 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 TBC1D5Q92609 795 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 ALS2CR12Q96Q35 445 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 ATP2C2O75185 946 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 CLGNO14967 610 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 DAAM2Q86T65 1068 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 EXOC1Q9NV70 894 aa18.31■□□□□ 0.52
CACNA1A-221ENST00000636012 MCM4P33991 863 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 ACTN2P35609 894 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 PDCL2Q8N4E4 241 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 SCAND2PQ9GZW5 306 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 AMOTL2Q9Y2J4 779 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 LDHCP07864 332 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 OGFOD1Q8N543 542 aa18.3■□□□□ 0.52
CACNA1A-221ENST00000636012 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 TMC6Q7Z403 805 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 CRNKL1Q9BZJ0 848 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 LRPPRCP42704 1394 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 IFIT1BQ5T764 474 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 NAA15Q9BXJ9 866 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 A0A1W2PRG0 241 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
CACNA1A-221ENST00000636012 NAP1L3Q99457 506 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 FAM114A1Q8IWE2 563 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 IQSEC3Q9UPP2 1182 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 GJB2P29033 226 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 GSTO1P78417 241 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 SATB1Q01826 763 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 MAATS1Q7Z4T9 603 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
CACNA1A-221ENST00000636012 CTAGE5O15320 804 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 CALM1P0DP23 149 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 CALM2P0DP24 149 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 CALM3P0DP25 149 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 LRRC45Q96CN5 670 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 KIF14Q15058 1648 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 CHRNA2Q15822 529 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 VEZTQ9HBM0 779 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 LIMCH1Q9UPQ0 1083 aa18.27■□□□□ 0.52
CACNA1A-221ENST00000636012 MXRA7P84157 204 aa18.27■□□□□ 0.51
CACNA1A-221ENST00000636012 GDPD2Q9HCC8 539 aa18.27■□□□□ 0.51
CACNA1A-221ENST00000636012 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms