RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 HOMER2Q9NSB8 354 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 DHX29Q7Z478 1369 aaKnown RBP7.4□□□□□ -1.22
TCF4-277ENST00000635990 TTC21BQ7Z4L5 1316 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 ZBTB7AO95365 584 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 USP8P40818 1118 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 FAM47CQ5HY64 1035 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 DHX37Q8IY37 1157 aaKnown RBP7.4□□□□□ -1.22
TCF4-277ENST00000635990 ANKRD1Q15327 319 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 DOK7Q18PE1 504 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 KRT27Q7Z3Y8 459 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 MAGEB6Q8N7X4 407 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 RNF214Q8ND24 703 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 PAGR1Q9BTK6 254 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 CDCA7Q9BWT1 371 aaPredicted RBP7.4□□□□□ -1.22
TCF4-277ENST00000635990 LDHBP07195 334 aaKnown RBP7.4□□□□□ -1.22
TCF4-277ENST00000635990 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 C2CD5Q86YS7 1000 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
TCF4-277ENST00000635990 FAM177A1Q8N128 213 aaPredicted RBP7.4□□□□□ -1.22
TCF4-277ENST00000635990 PROCA1Q8NCQ7 364 aaPredicted RBP7.4□□□□□ -1.23
TCF4-277ENST00000635990 UIMC1Q96RL1 719 aa7.4□□□□□ -1.23
TCF4-277ENST00000635990 IFT57Q9NWB7 429 aa7.4□□□□□ -1.23
TCF4-277ENST00000635990 FLIIQ13045 1269 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 COMMD10Q9Y6G5 202 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 NCBP1Q09161 790 aaKnown RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 TTF1Q15361 905 aaPredicted RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 SEPT7Q16181 437 aaKnown RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 CHD1LQ86WJ1 897 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 ABCC1P33527 1531 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 MAGEB6P1A0A0J9YX57 407 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 TMEM266Q2M3C6 531 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 IFIT1BQ5T764 474 aaKnown RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 SPC24Q8NBT2 197 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 ATP10BO94823 1461 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 SMARCE1Q969G3 411 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 ZNHIT6Q9NWK9 470 aaKnown RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 MCM9Q9NXL9 1143 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 CHST3Q7LGC8 479 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 FAM89AQ96GI7 184 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
TCF4-277ENST00000635990 BRD4O60885 1362 aaPredicted RBP7.39□□□□□ -1.23
TCF4-277ENST00000635990 CCDC194A0A1B0GVG4 234 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 GOLGA8AA7E2F4 631 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 GOLGA8BA8MQT2 603 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
TCF4-277ENST00000635990 KIF5BP33176 963 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 JMYQ8N9B5 988 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 WASF1Q92558 559 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 SBNO2Q9Y2G9 1366 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 STK25O00506 426 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 IPO9Q96P70 1041 aaKnown RBP7.38□□□□□ -1.23
TCF4-277ENST00000635990 MRPS9P82933 396 aaKnown RBP7.38□□□□□ -1.23
TCF4-277ENST00000635990 AKAP4Q5JQC9 854 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 CSADQ9Y600 493 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 MACROD2A1Z1Q3 448 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 SMARCC2Q8TAQ2 1214 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 PTPDC1A2A3K4 754 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 SULF1Q8IWU6 871 aa7.38□□□□□ -1.23
TCF4-277ENST00000635990 RNF41Q9H4P4 317 aaPredicted RBP7.38□□□□□ -1.23
TCF4-277ENST00000635990 TCP10L2B9ZVM9 353 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 BACH1O14867 736 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 TAF5LO75529 589 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 LMBR1LQ6UX01 489 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 CPXCR1Q8N123 301 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 ZNF335Q9H4Z2 1342 aaPredicted RBP7.37□□□□□ -1.23
TCF4-277ENST00000635990 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 MPNDQ8N594 471 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 PRPF40AO75400 957 aaKnown RBP7.37□□□□□ -1.23
TCF4-277ENST00000635990 PDCP20941 246 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 PDE6BP35913 854 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 CCDC83Q8IWF9 413 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 C14orf93Q9H972 538 aaKnown RBP7.37□□□□□ -1.23
TCF4-277ENST00000635990 GPCPD1Q9NPB8 672 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 PRKAG2Q9UGJ0 569 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 CEP131Q9UPN4 1083 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 MYCLP12524 364 aaPredicted RBP7.37□□□□□ -1.23
TCF4-277ENST00000635990 IRX3P78415 501 aaPredicted RBP7.37□□□□□ -1.23
TCF4-277ENST00000635990 TCERG1LQ5VWI1 586 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 SLC26A6Q9BXS9 759 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 TRAPPC8Q9Y2L5 1435 aa7.37□□□□□ -1.23
TCF4-277ENST00000635990 LPXNO60711 386 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 A1BGP04217 495 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 ALDH1B1P30837 517 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 DNA2P51530 1060 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 CTNNBL1Q8WYA6 563 aaPredicted RBP7.36□□□□□ -1.23
TCF4-277ENST00000635990 PANK2Q9BZ23 570 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 TTC21AQ8NDW8 1320 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 PHACTR2O75167 634 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 ATXN8OSP0DMR3 200 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 EIF5P55010 431 aaKnown RBP7.36□□□□□ -1.23
TCF4-277ENST00000635990 NUCB2P80303 420 aa7.36□□□□□ -1.23
TCF4-277ENST00000635990 NOP56O00567 594 aaKnown RBP7.36□□□□□ -1.23
TCF4-277ENST00000635990 HARSP12081 509 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1666.1 ms