RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 RTN1Q16799 776 aa9.59□□□□□ -0.87
AC004943.3-201ENST00000624116 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
AC004943.3-201ENST00000624116 BHMTQ93088 406 aa9.59□□□□□ -0.87
AC004943.3-201ENST00000624116 LILRB5O75023 590 aa9.58□□□□□ -0.88
AC004943.3-201ENST00000624116 EPB42P16452 691 aa9.58□□□□□ -0.88
AC004943.3-201ENST00000624116 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
AC004943.3-201ENST00000624116 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
AC004943.3-201ENST00000624116 STARD13Q9Y3M8 1113 aa9.58□□□□□ -0.88
AC004943.3-201ENST00000624116 FAM196BA6NMK8 535 aa9.57□□□□□ -0.88
AC004943.3-201ENST00000624116 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
AC004943.3-201ENST00000624116 UBE2OQ9C0C9 1292 aaKnown RBP9.57□□□□□ -0.88
AC004943.3-201ENST00000624116 A6NJR5 290 aa9.56□□□□□ -0.88
AC004943.3-201ENST00000624116 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
AC004943.3-201ENST00000624116 IGFBP4P22692 258 aa9.56□□□□□ -0.88
AC004943.3-201ENST00000624116 PTK7Q13308 1070 aa9.56□□□□□ -0.88
AC004943.3-201ENST00000624116 DOC2BQ14184 412 aa9.56□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L21D6R901 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 NID1P14543 1247 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 DPYDQ12882 1025 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 PCSK7Q16549 785 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 XP32Q5T750 250 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
AC004943.3-201ENST00000624116 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
AC004943.3-201ENST00000624116 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
AC004943.3-201ENST00000624116 CRTC2Q53ET0 693 aaPredicted RBP9.54□□□□□ -0.88
AC004943.3-201ENST00000624116 C20orf204Q6ZNR8 217 aa9.54□□□□□ -0.88
AC004943.3-201ENST00000624116 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
AC004943.3-201ENST00000624116 CCINQ13939 588 aa9.53□□□□□ -0.88
AC004943.3-201ENST00000624116 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
AC004943.3-201ENST00000624116 SEMA6BQ9H3T3 888 aa9.53□□□□□ -0.88
AC004943.3-201ENST00000624116 SLC6A14Q9UN76 642 aa9.53□□□□□ -0.88
AC004943.3-201ENST00000624116 C9orf172C9J069 976 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 RAC1P63000 192 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 KANK4Q5T7N3 995 aaPredicted RBP9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 IGFLR1Q9H665 355 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 JPH1Q9HDC5 661 aaPredicted RBP9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 C11orf16Q9NQ32 467 aa9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
AC004943.3-201ENST00000624116 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 FOXO3O43524 673 aa9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 Q8N3U1 123 aa9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.89
AC004943.3-201ENST00000624116 ELNP15502 786 aa9.5□□□□□ -0.89
AC004943.3-201ENST00000624116 NFKB1P19838 968 aa9.49□□□□□ -0.89
AC004943.3-201ENST00000624116 NRG1Q02297 640 aaPredicted RBP9.49□□□□□ -0.89
AC004943.3-201ENST00000624116 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
AC004943.3-201ENST00000624116 ARID4AP29374 1257 aaPredicted RBP9.48□□□□□ -0.89
AC004943.3-201ENST00000624116 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
AC004943.3-201ENST00000624116 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 RGS9O75916 674 aaPredicted RBP9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 MAP3K6O95382 1288 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 IDH3AP50213 366 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 ARSDP51689 593 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 GRIK4Q16099 956 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 BCS1LQ9Y276 419 aa9.47□□□□□ -0.89
AC004943.3-201ENST00000624116 INPP5BP32019 993 aa9.46□□□□□ -0.9
AC004943.3-201ENST00000624116 RSPO4Q2I0M5 234 aaPredicted RBP9.46□□□□□ -0.9
AC004943.3-201ENST00000624116 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
AC004943.3-201ENST00000624116 WEE1P30291 646 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 AFF1P51825 1210 aaKnown RBP9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 DGKZQ13574 1117 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 ZMYM1Q5SVZ6 1142 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 FAM35AQ86V20 835 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 FAM200AQ8TCP9 573 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 MYO19Q96H55 970 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 ARXQ96QS3 562 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 KLK14Q9P0G3 267 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 FRRS1LQ9P0K9 344 aa9.45□□□□□ -0.9
AC004943.3-201ENST00000624116 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
AC004943.3-201ENST00000624116 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
AC004943.3-201ENST00000624116 DTWD1Q8N5C7 304 aa9.44□□□□□ -0.9
AC004943.3-201ENST00000624116 LENG1Q96BZ8 264 aaPredicted RBP9.44□□□□□ -0.9
AC004943.3-201ENST00000624116 DYRK3O43781 588 aa9.43□□□□□ -0.9
AC004943.3-201ENST00000624116 ITGB7P26010 798 aa9.43□□□□□ -0.9
AC004943.3-201ENST00000624116 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
AC004943.3-201ENST00000624116 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
AC004943.3-201ENST00000624116 NAGPAQ9UK23 515 aa9.43□□□□□ -0.9
AC004943.3-201ENST00000624116 LGR5O75473 907 aa9.42□□□□□ -0.9
AC004943.3-201ENST00000624116 MICAL2O94851 1124 aa9.42□□□□□ -0.9
AC004943.3-201ENST00000624116 RARAP10276 462 aa9.42□□□□□ -0.9
AC004943.3-201ENST00000624116 RFX1P22670 979 aa9.42□□□□□ -0.9
AC004943.3-201ENST00000624116 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms