RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 CASP7P55210 303 aa18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 KCNQ4P56696 695 aa18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 ZBTB38Q8NAP3 1195 aaPredicted RBP18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 LY75O60449 1722 aa18.39■□□□□ 0.54
GTF2F1-202ENST00000593678 TRIM37O94972 964 aa18.39■□□□□ 0.53
GTF2F1-202ENST00000593678 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
GTF2F1-202ENST00000593678 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
GTF2F1-202ENST00000593678 PLEKHM2Q8IWE5 1019 aa18.39■□□□□ 0.53
GTF2F1-202ENST00000593678 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
GTF2F1-202ENST00000593678 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
GTF2F1-202ENST00000593678 TRMT112Q9UI30 125 aaKnown RBP18.38■□□□□ 0.53
GTF2F1-202ENST00000593678 GNPATO15228 680 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 RPS6KA4O75676 772 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 FAM89AQ96GI7 184 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 AK7Q96M32 723 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
GTF2F1-202ENST00000593678 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
GTF2F1-202ENST00000593678 CLEC4GQ6UXB4 293 aa18.36■□□□□ 0.53
GTF2F1-202ENST00000593678 ZNF34Q8IZ26 560 aa18.36■□□□□ 0.53
GTF2F1-202ENST00000593678 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
GTF2F1-202ENST00000593678 CDHR2Q9BYE9 1310 aa18.36■□□□□ 0.53
GTF2F1-202ENST00000593678 HSP90B1P14625 803 aaKnown RBP18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 MX1P20591 662 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 FOXO4P98177 505 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 SIL1Q9H173 461 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 RGL2O15211 777 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 ZPR1O75312 459 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
GTF2F1-202ENST00000593678 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 OTUD7AQ8TE49 926 aaPredicted RBP18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 PLA2G12BQ9BX93 195 aa18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 TAF1LQ8IZX4 1826 aa18.34■□□□□ 0.53
GTF2F1-202ENST00000593678 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
GTF2F1-202ENST00000593678 PDE1AP54750 535 aa18.33■□□□□ 0.52
GTF2F1-202ENST00000593678 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.52
GTF2F1-202ENST00000593678 IRS4O14654 1257 aaPredicted RBP18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 IFIT2P09913 472 aaKnown RBP18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 BCORQ6W2J9 1755 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 PTPN12Q05209 780 aaKnown RBP18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 TAF7LQ5H9L4 462 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
GTF2F1-202ENST00000593678 AOX1Q06278 1338 aa18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 RFC4P35249 363 aa18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 RFX5P48382 616 aaPredicted RBP18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 TRAPPC3LQ5T215 181 aa18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
GTF2F1-202ENST00000593678 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
GTF2F1-202ENST00000593678 PDE8AO60658 829 aa18.3■□□□□ 0.52
GTF2F1-202ENST00000593678 IFIT5Q13325 482 aaKnown RBP18.3■□□□□ 0.52
GTF2F1-202ENST00000593678 CDC45O75419 566 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 PHF14O94880 888 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 ADRA2BP18089 450 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 AACSQ86V21 672 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 ERC2O15083 957 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 APBA3O96018 575 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 CTSWP56202 376 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 LRRC4BQ9NT99 713 aa18.29■□□□□ 0.52
GTF2F1-202ENST00000593678 MYH3P11055 1940 aa18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 SASH1O94885 1247 aa18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 CSF1RP07333 972 aa18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
GTF2F1-202ENST00000593678 EP400Q96L91 3159 aa18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 SETDB2Q96T68 719 aa18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
GTF2F1-202ENST00000593678 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
GTF2F1-202ENST00000593678 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
GTF2F1-202ENST00000593678 PLSCR1O15162 318 aa18.26■□□□□ 0.51
GTF2F1-202ENST00000593678 TXNRD1Q16881 649 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms