RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 ST5P78524 1137 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 SLC10A5Q5PT55 438 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
H3F3B-212ENST00000592643 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 MYD88Q99836 296 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
H3F3B-212ENST00000592643 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
H3F3B-212ENST00000592643 PIM2Q9P1W9 311 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
H3F3B-212ENST00000592643 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.03
H3F3B-212ENST00000592643 PDE6BP35913 854 aa15.21■□□□□ 0.03
H3F3B-212ENST00000592643 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
H3F3B-212ENST00000592643 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
H3F3B-212ENST00000592643 BCS1LQ9Y276 419 aa15.21■□□□□ 0.03
H3F3B-212ENST00000592643 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.02
H3F3B-212ENST00000592643 F6X3S4 739 aa15.2■□□□□ 0.02
H3F3B-212ENST00000592643 H0YIN7 160 aa15.2■□□□□ 0.02
H3F3B-212ENST00000592643 HCLS1P14317 486 aaPredicted RBP15.2■□□□□ 0.02
H3F3B-212ENST00000592643 C7orf43Q8WVR3 580 aa15.2■□□□□ 0.02
H3F3B-212ENST00000592643 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
H3F3B-212ENST00000592643 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
H3F3B-212ENST00000592643 PRELPP51888 382 aa15.19■□□□□ 0.02
H3F3B-212ENST00000592643 CWF19L2Q2TBE0 894 aaKnown RBP15.19■□□□□ 0.02
H3F3B-212ENST00000592643 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
H3F3B-212ENST00000592643 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
H3F3B-212ENST00000592643 JARID2Q92833 1246 aaPredicted RBP15.19■□□□□ 0.02
H3F3B-212ENST00000592643 BCL2L13Q9BXK5 485 aa15.19■□□□□ 0.02
H3F3B-212ENST00000592643 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
H3F3B-212ENST00000592643 COL4A1P02462 1669 aa15.19■□□□□ 0.02
H3F3B-212ENST00000592643 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
H3F3B-212ENST00000592643 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
H3F3B-212ENST00000592643 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
H3F3B-212ENST00000592643 TTLL6Q8N841 843 aa15.18■□□□□ 0.02
H3F3B-212ENST00000592643 MASTLQ96GX5 879 aa15.18■□□□□ 0.02
H3F3B-212ENST00000592643 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 NPHP1O15259 732 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
H3F3B-212ENST00000592643 GTF2E1P29083 439 aaPredicted RBP15.17■□□□□ 0.02
H3F3B-212ENST00000592643 HOXA10P31260 410 aaPredicted RBP15.17■□□□□ 0.02
H3F3B-212ENST00000592643 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
H3F3B-212ENST00000592643 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 DNAAF4Q8WXU2 420 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.024e-13■□□□□ 10.8
H3F3B-212ENST00000592643 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
H3F3B-212ENST00000592643 NPR1P16066 1061 aa15.16■□□□□ 0.02
H3F3B-212ENST00000592643 RARSP54136 660 aaKnown RBP15.16■□□□□ 0.02
H3F3B-212ENST00000592643 CASP7P55210 303 aa15.16■□□□□ 0.02
H3F3B-212ENST00000592643 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
H3F3B-212ENST00000592643 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
H3F3B-212ENST00000592643 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
H3F3B-212ENST00000592643 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
H3F3B-212ENST00000592643 NFKBIEO00221 500 aa15.15■□□□□ 0.02
H3F3B-212ENST00000592643 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
H3F3B-212ENST00000592643 ALDH1L2Q3SY69 923 aa15.15■□□□□ 0.02
H3F3B-212ENST00000592643 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
H3F3B-212ENST00000592643 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
H3F3B-212ENST00000592643 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
H3F3B-212ENST00000592643 H7C1W4 665 aa15.14■□□□□ 0.01
H3F3B-212ENST00000592643 C21orf2O43822 256 aa15.14■□□□□ 0.01
H3F3B-212ENST00000592643 CT47B1P0C2W7 299 aaPredicted RBP15.14■□□□□ 0.01
H3F3B-212ENST00000592643 GCKRQ14397 625 aa15.14■□□□□ 0.01
H3F3B-212ENST00000592643 LINS1Q8NG48 757 aa15.14■□□□□ 0.01
H3F3B-212ENST00000592643 ARFGEF1Q9Y6D6 1849 aa15.13■□□□□ 0.01
H3F3B-212ENST00000592643 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
H3F3B-212ENST00000592643 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
H3F3B-212ENST00000592643 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
H3F3B-212ENST00000592643 CNKSR1Q969H4 720 aa15.13■□□□□ 0.01
H3F3B-212ENST00000592643 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
H3F3B-212ENST00000592643 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
H3F3B-212ENST00000592643 LAMB2P55268 1798 aa15.12■□□□□ 0.01
H3F3B-212ENST00000592643 RASSF7Q02833 373 aa15.12■□□□□ 0.01
H3F3B-212ENST00000592643 SF3B3Q15393 1217 aaKnown RBP15.12■□□□□ 0.01
H3F3B-212ENST00000592643 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
H3F3B-212ENST00000592643 CRAMP1Q96RY5 1269 aa15.12■□□□□ 0.01
H3F3B-212ENST00000592643 ABCC4O15439 1325 aa15.12■□□□□ 0.01
H3F3B-212ENST00000592643 BCAR3O75815 825 aa15.11■□□□□ 0.01
H3F3B-212ENST00000592643 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
H3F3B-212ENST00000592643 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
H3F3B-212ENST00000592643 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
H3F3B-212ENST00000592643 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
H3F3B-212ENST00000592643 TNNQ9UQP3 1299 aa15.1■□□□□ 0.01
H3F3B-212ENST00000592643 CACNA1FO60840 1977 aa15.1■□□□□ 0.01
H3F3B-212ENST00000592643 PTPRCP08575 1304 aa15.1■□□□□ 0.01
H3F3B-212ENST00000592643 YY1P25490 414 aa15.09■□□□□ 0.01
H3F3B-212ENST00000592643 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
H3F3B-212ENST00000592643 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
H3F3B-212ENST00000592643 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
H3F3B-212ENST00000592643 KAZALD1Q96I82 304 aa15.09■□□□□ 0.01
H3F3B-212ENST00000592643 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
H3F3B-212ENST00000592643 ALDH1B1P30837 517 aa15.08■□□□□ 0
H3F3B-212ENST00000592643 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
H3F3B-212ENST00000592643 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
H3F3B-212ENST00000592643 RBM17Q96I25 401 aaKnown RBP15.08■□□□□ 0
H3F3B-212ENST00000592643 PDE8AO60658 829 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms